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Protein Overview: gi|24350215, gi|...

General Information:
Name(s) found: gi|24375385 [NCBI NR]
gi|24350215 [NCBI NR]
Description(s) found:
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  • gi|24375385|ref|NP_719428.1| DNA topoisomerase IV subunit A [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24350215|gb|AAN56872.1|AE015822_4 DNA topoisomerase IV, A subunit [Shewanella oneidensis MR-1] [NCBI NR]
  • DNA topoisomerase IV, A subunit [Shewanella oneidensis MR-1]gi|24350215|gb|AAN56872.1| DNA topoisomerase IV, A subunit [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • DNA topoisomerase IV, A subunit [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
  • DNA topoisomerase IV subunit A [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 758 amino acids

    Gene Ontology:
    Cellular Component: DNA topoisomerase IV complex [ISSLink to PubMed article]
    Biological Process: DNA topological change [ISSLink to PubMed article]
    Molecular Function: DNA topoisomerase (ATP-hydrolyzing) activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDAIKLSLD GVEQMPLRRF TEEAYLNYSM YVIMDRALPH IGDGLKPVQR RIIYAMSELG  60
   61 LSAQSKHKKS ARTVGDVLGK YHPHGDSACY EAMVLMAQPF SYRYPLVDGQ GNWGAPDDPK 120
  121 SFAAMRYTEA RLSKFSEVLL SELGQGTVEW GANFDGTLKE PKVLPARLPH ILLNGITGIA 180
  181 VGMATDIPPH NVRELVNACV ALLDEPKLDL EQLMAYVPGP DYPTEAEIIT PAADIAKIYE 240
  241 TGRGSLKARA VYSVEAGEIV ITALPHQASS GKILELIAAQ MQAKKLPMVA DLRDESDHEN 300
  301 PVRLVIVPRS NRVDCDQLMA HLFATTDLEK SFRVNLNVLG LDGRPRVKGL KDLLTEWLEF 360
  361 RVDTVRRRLE YRLDKVLARL HILEALMIAF LNIDEVIEII RFHDEPKAEL MARFNLTDKQ 420
  421 AEAILELKLR HLAKLEEFKI KAEQDELEAE REKLEQLLGS ERRLKTLIKK ELIQDGETYG 480
  481 DDRRSPIVER HESKALTEQE LTPSEPVTVV LSDKGWVRSA KGHDIDAESL SYKAGDQYLC 540
  541 SAMGRSNQAA VFIDSSGRAF ATDSHSLPSA RSQGEPITTR FNMAPGETMQ HVILGEDEQC 600
  601 FLLATDAGYG FICTFNDMVS RNKAGKALLS LPTNAKSLPP KPIDRNREMS ILAITNEGRM 660
  661 LLFSLEALPQ LSKGKGNKII GIPSERAKNR EELMTHLQLV PADTSVTLWA GKRKLTLKPS 720
  721 DLEHYRGERG RRGAKLPRGL QRVDSMELGE GAEPIPSI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..758] PSI-BLAST 1000.0 Structure of the full-length E. coli ParC subunit


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle