YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|24375343, gi|...

General Information:
Name(s) found: gi|24375343 [NCBI NR]
gi|24350161 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|24375343|ref|NP_719386.1| ISSod12, transposase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24350161|gb|AAN56830.1|AE015818_6 ISSod12, transposase [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 307 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: transposition, DNA-mediated [ISSLink to PubMed article]
    Molecular Function: transposase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKPRYKTTN WKQYNQTLIN RGSLTFWIDE DVIAKWKAKV EQPEKGRPRV FSDLAITTAL  60
   61 MVKRVLSMPL RALRGFIYSV FKLSDIPLSC PHYTCISKRA KTVNIAFKTK TRGTLEHLAI 120
  121 DSTGLKVYGE GEWEVKKHGT DGKRRVWRKL HIAVDTHSHE IIAAELSLSG VTDAEVMPNL 180
  181 LKQTHRKIRN ISGDGAYDTR ACHEAVRRKQ ALVLIPPREG AALWEQGHPR NLAVSWLQLH 240
  241 GSNKQWKKQY GYHRRSISET TMYRIKQLLG GTLCMRNYNA QVEETNTMIR ALNKLTGLGM 300
  301 PETHYIL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..307] FFAS03 1.43 Transposase inhibitor (Tn5 transposase)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  1.53924789709051 bayes_pls_golite062009
  • nuclease activity
    		•  1.33447740033502 bayes_pls_golite062009
  • hydrolase activity, acting on ester bonds
    		•  1.23347009562032 bayes_pls_golite062009
  • hydrolase activity
    		•  1.22075366957547 bayes_pls_golite062009
  • exonuclease activity
    		•  1.20458535230258 bayes_pls_golite062009
  • transposase activity
    		•  0.965908684749648 bayes_pls_golite062009
  • deoxyribonuclease activity
    		•  0.330313608754008 bayes_pls_golite062009
  • ribonuclease activity
    		•  0.26323966197813 bayes_pls_golite062009
  • exonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters
    		•  0.248165509716873 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle