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Protein Overview: gi|24350104, gi|...

General Information:
Name(s) found: gi|24375297 [NCBI NR]
gi|24350104 [NCBI NR]
Description(s) found:
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  • gi|24375297|ref|NP_719340.1| aromatic acid decarboxylase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24350104|gb|AAN56784.1|AE015814_4 phenylacrylic acid decarboxylase, 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, putative [Shewanella oneidensis MR-1] [NCBI NR]
  • phenylacrylic acid decarboxylase, 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, putative [Shewanella oneidensis MR-1]gi|24350104|gb|AAN56784.1| phenylacrylic acid decarboxylase, 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, putative [Shewanella oneidensi [nrdb_11152004_Chlamydomonas]
  • phenylacrylic acid decarboxylase, 3-octaprenyl-4-hydroxybenzoate carboxy-lyase, putative [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
  • 3-octaprenyl-4-hydroxybenzoate carboxy-lyase [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 219 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: ubiquinone biosynthetic process [ISSLink to PubMed article]
    Molecular Function: 3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAYAKSSKAI SLAWTGASGA PYGLKLLECL LASGYQVFLM ISSAARVVLA TEHGLQLSAN  60
   61 SDKAKAQLLD VLAQKNIPLS GELVVLGKDE WFSPPASGSA APKQMVICPC STGTLAAVAT 120
  121 GMSNNLLERA ADVVLKERGQ LILVPRETPF NAIHLEHMLN LSRLGATIMP AAPGFYHNPK 180
  181 SVEDLIDFMV ARILDHLGVD HALTSRWGYD KHSPNDIDN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..219] PSI-BLAST 58.0 Crystal Structure of dodecameric FMN-dependent Ubix-like Decarboxylase from Escherichia coli O157:H7

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • 3-octaprenyl-4-hydroxybenzoate carboxy-lyase activity
    		•  5.88631349530005 bayes_pls_golite062009
  • carboxy-lyase activity
    		•  2.27469953971238 bayes_pls_golite062009
  • catalytic activity
    		•  1.88716391063227 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  1.67751595868044 bayes_pls_golite062009
  • phosphopantothenoylcysteine decarboxylase activity
    		•  1.6488492075417 bayes_pls_golite062009
  • lyase activity
    		•  0.646446561158526 bayes_pls_golite062009
  • phosphopantothenate--cysteine ligase activity
    		•  0.35505046579356 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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