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Protein Overview: gi|24375181, gi|...

General Information:
Name(s) found: gi|24375181 [NCBI NR]
gi|24349961 [NCBI NR]
Description(s) found:
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  • gi|24375181|ref|NP_719224.1| coniferyl aldehyde dehydrogenase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349961|gb|AAN56668.1|AE015802_14 coniferyl aldehyde dehydrogenase [Shewanella oneidensis MR-1] [NCBI NR]
  • coniferyl aldehyde dehydrogenase [Shewanella oneidensis MR-1]gi|24349961|gb|AAN56668.1| coniferyl aldehyde dehydrogenase [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • coniferyl aldehyde dehydrogenase [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 474 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: fermentation [ISSLink to PubMed article]
    Molecular Function: aldehyde dehydrogenase (NAD) activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNMATDPTQI SPLTELLQRQ RASYLAAPNP DYAIRKERLT RLKTALLNYQ QPLVEALSQD  60
   61 YGHRSTDDSL ISDIMPVVNN INYSLKNLKK WLKPSRRHAG ILLAPAQVKV HYQPLGVIGI 120
  121 IVPWNFPVML SIGPLVTAIA AGNHAMLKLS EFTPATNKVI KQLLTEVFDE SHVAIVEGEA 180
  181 DVAAQFSALP FDHLLFTGST TVGRHVMRAA ANNLTPVTLE LGGKSPVIIA PDMPLEIAVE 240
  241 RMIYGKCLNA GQICVAPDYV LCPNAKVNDF IQAYQAKFLA MYGEVAKNKD YGSIINARQF 300
  301 DRLMAVLEDA KTKGAKIISA SNEAIDSLNR KIPTQLITHT TEDMQLMQEE IFGPLLPIIG 360
  361 YDTLDEAIRY INLRARPLAL YVMSFDEANQ QKILQQTHSG GVCINETVFH VAADDAPFGG 420
  421 IGPSGMGHYH GKEGFLTFSH AKTVLSRGRF NTGKFVHPPY GTFIQRMLMK LFLR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..474] PSI-BLAST 113.0 Aldehyde reductase (dehydrogenase), ALDH

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • oxidoreductase activity
    		•  4.47226217021998 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors
    		•  4.34495776828926 bayes_pls_golite062009
  • methylmalonate-semialdehyde dehydrogenase (acylating) activity
    		•  3.87605237828483 bayes_pls_golite062009
  • succinate-semialdehyde dehydrogenase [NAD(P)+] activity
    		•  3.64672165191647 bayes_pls_golite062009
  • 3-chloroallyl aldehyde dehydrogenase activity
    		•  3.37049090049734 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
    		•  3.2867555127991 bayes_pls_golite062009
  • aldehyde dehydrogenase (NAD) activity
    		•  2.81851373615334 bayes_pls_golite062009
  • catalytic activity
    		•  2.80804701752928 bayes_pls_golite062009
  • succinate-semialdehyde dehydrogenase activity
    		•  2.71501590413507 bayes_pls_golite062009
  • 1-pyrroline-5-carboxylate dehydrogenase activity
    		•  2.6673036327943 bayes_pls_golite062009
  • aldehyde dehydrogenase [NAD(P)+] activity
    		•  2.43250909158896 bayes_pls_golite062009
  • benzaldehyde dehydrogenase activity
    		•  2.02102050611755 bayes_pls_golite062009
  • malonate-semialdehyde dehydrogenase (acetylating) activity
    		•  1.75951883819887 bayes_pls_golite062009
  • retinal dehydrogenase activity
    		•  1.42867174920845 bayes_pls_golite062009
  • binding
    		•  1.06673666884196 bayes_pls_golite062009
  • retinoid binding
    		•  0.983782635681687 bayes_pls_golite062009
  • isoprenoid binding
    		•  0.900374761028287 bayes_pls_golite062009
  • protein binding
    		•  0.894945263794726 bayes_pls_golite062009
  • glutamate-5-semialdehyde dehydrogenase activity
    		•  0.882678635212924 bayes_pls_golite062009
  • electron carrier activity
    		•  0.869224905025397 bayes_pls_golite062009
  • hydrolase activity
    		•  0.352374326884796 bayes_pls_golite062009
  • benzaldehyde dehydrogenase (NAD+) activity
    		•  0.23487570676521 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.57

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle