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Protein Overview: gi|24349393, gi|...

General Information:
Name(s) found: gi|24374733 [NCBI NR]
gi|24349393 [NCBI NR]
Description(s) found:
Found 5 descriptions.
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  • gi|24374733|ref|NP_718776.1| flagellar motor switch protein FliM [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349393|gb|AAN56220.1|AE015759_12 flagellar motor switch protein FliM [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 343 amino acids

    Gene Ontology:
    Cellular Component: bacterial-type flagellum [ISSLink to PubMed article]
    Biological Process: ciliary or flagellar motility [ISSLink to PubMed article]
    Molecular Function: structural molecule activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSDLLSQDEI DALLHGVDDV EEDNELDAVG QEARSYDFSS QDRIVRGRMP TLEIVNERFA  60
   61 RHLRISMFNM MRRAAEVSIN GVQMLKFGEY VHTLFVPTSL NMVRFHPLKG TALITMEARL 120
  121 VFILVDNFFG GDGRFHAKIE GREFTPTERR IVQLLLKIIF EDYKDAWAPV MDVEFDYLDS 180
  181 EVNPAMANIV SPTEVVVINS FHIEVDGGGG DFHITMPYSM IEPIRELLDA GVQSDKQDTD 240
  241 MRWSQALHDE IMDVKVGFDA TVVEHELTLK DVMNFKAGDI IPIELPEYIM MRIEDLPTYR 300
  301 CKMGRSRDNL ALKIYEKIPR PETVKSELQL VTRKGKARDI SEL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..236] PSI-BLAST 42.522879 No description for 2hp7A was found.
    2 View Details [237..343] PSI-BLAST 16.39794 Crystal structure of the c-terminal fragment of the putative flagelar motor switch protein FliN (TM0680a) from Thermotoga maritima at 1.85 A resolution

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • motor activity
    		•  3.07201707618408 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  1.17271522721174 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  1.12849207458848 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  1.10878539079436 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  1.10781034885807 bayes_pls_golite062009
  • binding
    		•  0.851616221377121 bayes_pls_golite062009
  • hydrolase activity
    		•  0.325371951256 bayes_pls_golite062009
  • protein binding
    		•  0.253452523212299 bayes_pls_golite062009
  • catalytic activity
    		•  0.145477743192426 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle