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Protein Overview: TGT_SHEON

General Information:
Name(s) found: TGT_SHEON [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
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  • Queuine tRNA-ribosyltransferase OS=Shewanella oneidensis (strain MR-1) GN=tgt PE=3 SV=1 [Swiss-Prot]
    • Organism: Shewanella oneidensis MR-1
    Length: 374 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: tRNA modification [ISSLink to PubMed article]
    Molecular Function: queuine tRNA-ribosyltransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFELDTTDG RARRGRLIFD RGTVETPAFM PVGTYGTVKG MTPEEVRATG ADILLGNTFH  60
   61 LWLRPGEEIM RKHGDLHDFM NWQRPILTDS GGFQVFSLGD IRKITEEGVH FRSPINGEKI 120
  121 FLDPEKSMQI QHALGSDVVM IFDECTPYPA TEDEARKSMQ MSLRWAKRSR DEFDRLENPN 180
  181 SLFGIIQGSV YEDLRDESLK GLVEIGFDGY AVGGLAVGEP KEDMHRILEH VCPQILADKP 240
  241 RYLMGVGKPE DLVEGVRRGI DMFDCVMPTR NARNGHLFTS EGVIKIRNAR HRDDTSPLDP 300
  301 KCDCYTCKNY SRAYLYHLDR CNEILGARLN TIHNLRYYQM LMEGLRGAIE TGTLDAFVKD 360
  361 FYTSQGREVP ELVD

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..374] PSI-BLAST 160.0 Y106F mutant of Z. mobilis TGT

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • queuine tRNA-ribosyltransferase activity
    		•  5.68673071384353 bayes_pls_golite062009
  • transferase activity
    		•  3.21194535271238 bayes_pls_golite062009
  • transferase activity, transferring pentosyl groups
    		•  2.84864811414771 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  2.53039738178366 bayes_pls_golite062009
  • catalytic activity
    		•  2.02168745464921 bayes_pls_golite062009
  • binding
    		•  1.29132603807317 bayes_pls_golite062009
  • protein binding
    		•  0.136438951368546 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle