Protein Overview: gi|24349241, gi|...

General Information:
Name(s) found:	gi\|24374618 [NCBI NR] gi\|24349241 [NCBI NR]
Description(s) found: Found 4 descriptions. SHOW ALL	gi\|24374618\|ref\|NP_718661.1\| long-chain fatty acid transport protein, putative [Shewanella oneidensis MR-1] [NCBI NR] gi\|24349241\|gb\|AAN56105.1\|AE015747_1 long-chain fatty acid transport protein, putative [Shewanella oneidensis MR-1] [NCBI NR]
Organism:	Shewanella oneidensis MR-1
Length:	440 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	long-chain fatty acid transport [ISS]
Molecular Function:	long-chain fatty acid transporter activity [ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSFNKTLLT VAIALASSQT FASGFQLNSQ SATGMGRAFA GDAVIADNAT VLSRNPAAMA  60
   61 LFDKDAISFG LTYADITVDV KDVNFNLPNG AVDLGSIDDA GSSKVIPNIF YIHPIDDKFA 120
  121 VGFAAFSNFG TGTDASSLSK NLPKGSPAPY DLLGETEVTT VNFNASVSYR INDIFSIGAG 180
  181 VDAIYGEGRL TRNASTTPLV DVDADGWAFG GILGATVELD KDNRFGISYR FSPTVNVEGD 240
  241 INTISTKDLS AAGLGSKTAL ATNFDSLDVP LADIFQVAGF HQITPKFALH YTAQYTQWSK 300
  301 FDQITAKDGV ATIIPGQAGA GIKLPAGDIA LKEYQWKDSW LFSLGGTYTI NEQFTVRAGY 360
  361 MHDQGVVDEI SSISFPDSDR NWYTAGMSYH INPQNTVDFG IAFIKGEEVH LIENSAITGP 420
  421 VNAITESSGM YYSVQYSYQF

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

Term	Confidence	Notes
transporter activity	4.15398171369398	bayes_pls_golite062009
lipid transporter activity	3.80341435685844	bayes_pls_golite062009
long-chain fatty acid transporter activity	3.64136299874986	bayes_pls_golite062009
fatty acid transporter activity	3.42515380308484	bayes_pls_golite062009
substrate-specific transporter activity	2.43332676180972	bayes_pls_golite062009
transmembrane transporter activity	1.99898520864149	bayes_pls_golite062009
substrate-specific transmembrane transporter activity	1.37880749517427	bayes_pls_golite062009
ion transmembrane transporter activity	0.9810521942815	bayes_pls_golite062009
cation transmembrane transporter activity	0.89213734347785	bayes_pls_golite062009
metal ion transmembrane transporter activity	0.70757821289609	bayes_pls_golite062009
binding	0.643879907209189	bayes_pls_golite062009
inorganic cation transmembrane transporter activity	0.60516455096546	bayes_pls_golite062009
di-, tri-valent inorganic cation transmembrane transporter activity	0.17491456011246	bayes_pls_golite062009
protein binding	0.0112080975548029	bayes_pls_golite062009

Source: Reynolds et al. 2008. Manuscript submitted

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..440]	PSI-BLAST	70.522879	Crystal structure of the bacterial fatty acid transporter FadL from Escherichia coli

Protein Overview: gi|24349241, gi|...

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: