| Protein: | gi|24349241, gi|... |
| Organism: | Shewanella oneidensis MR-1 |
| Length: | 440 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24349241, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
320.0 | [0..1] | [440..1] |
|
|
320.0 | [0..1] | [440..9] |
|
|
311.0 | [0..1] | [440..1] |
|
|
310.0 | [0..1] | [440..1] |
|
Region A: Residues: [1-440] |
1 11 21 31 41 51
| | | | | |
1 MKSFNKTLLT VAIALASSQT FASGFQLNSQ SATGMGRAFA GDAVIADNAT VLSRNPAAMA 60
61 LFDKDAISFG LTYADITVDV KDVNFNLPNG AVDLGSIDDA GSSKVIPNIF YIHPIDDKFA 120
121 VGFAAFSNFG TGTDASSLSK NLPKGSPAPY DLLGETEVTT VNFNASVSYR INDIFSIGAG 180
181 VDAIYGEGRL TRNASTTPLV DVDADGWAFG GILGATVELD KDNRFGISYR FSPTVNVEGD 240
241 INTISTKDLS AAGLGSKTAL ATNFDSLDVP LADIFQVAGF HQITPKFALH YTAQYTQWSK 300
301 FDQITAKDGV ATIIPGQAGA GIKLPAGDIA LKEYQWKDSW LFSLGGTYTI NEQFTVRAGY 360
361 MHDQGVVDEI SSISFPDSDR NWYTAGMSYH INPQNTVDFG IAFIKGEEVH LIENSAITGP 420
421 VNAITESSGM YYSVQYSYQF
|
| Detection Method: |  |
| Confidence: | 70.522879 |
| Match: | 1t16A |
| Description: | Crystal structure of the bacterial fatty acid transporter FadL from Escherichia coli |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transporter activity | 4.15398171369398 | bayes_pls_golite062009 |
| lipid transporter activity | 3.80341435685844 | bayes_pls_golite062009 |
| long-chain fatty acid transporter activity | 3.64136299874986 | bayes_pls_golite062009 |
| fatty acid transporter activity | 3.42515380308484 | bayes_pls_golite062009 |
| substrate-specific transporter activity | 2.43332676180972 | bayes_pls_golite062009 |
| transmembrane transporter activity | 1.99898520864149 | bayes_pls_golite062009 |
| substrate-specific transmembrane transporter activity | 1.37880749517427 | bayes_pls_golite062009 |
| ion transmembrane transporter activity | 0.9810521942815 | bayes_pls_golite062009 |
| cation transmembrane transporter activity | 0.89213734347785 | bayes_pls_golite062009 |
| metal ion transmembrane transporter activity | 0.70757821289609 | bayes_pls_golite062009 |
| binding | 0.643879907209189 | bayes_pls_golite062009 |
| inorganic cation transmembrane transporter activity | 0.60516455096546 | bayes_pls_golite062009 |
| di-, tri-valent inorganic cation transmembrane transporter activity | 0.17491456011246 | bayes_pls_golite062009 |
| protein binding | 0.0112080975548029 | bayes_pls_golite062009 |
