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Protein Overview: gi|24374547, gi|...

General Information:
Name(s) found: gi|24374547 [NCBI NR]
gi|24349139 [NCBI NR]
Description(s) found:
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  • gi|24374547|ref|NP_718590.1| bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24349139|gb|AAN56034.1|AE015738_9 indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase [Shewanella oneidensis MR-1] [NCBI NR]
  • indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase [Shewanella oneidensis MR-1]gi|24349139|gb|AAN56034.1| indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
  • bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 469 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: tryptophan biosynthetic process [ISSLink to PubMed article]
    Molecular Function: indole-3-glycerol-phosphate synthase activity [ISSLink to PubMed article]
    phosphoribosylanthranilate isomerase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTSTTQANV LTRIVDTKAA HIAALKLRFP EASLVPKVSD RSLFAALKAP KAGYILECKK  60
   61 ASPSKGLIRK DFDVEAIASI YTKYAAGISV LTDEQFFQGD MDYIPKVRAK VSQPILCKDF 120
  121 FVDEYQVKLA AHQGADAILL MLSVLDDERY QQLASEAAKY QLDVLTEISN EEELKRAIAL 180
  181 NAPIIGINNR NLRDLSTDLA TTEALAPHIG SDRVVISESG IYTNDQVRRL SPLVDGFLVG 240
  241 SSIMAEEDID LACRKLIFGH NKVCGLTRLE DIEAAANAGA VYAGLIFAEK SPRALTKDAA 300
  301 KQLVEQYRAA KLPAIEFVGV FVNNTPKLIA SIAKACDLAA VQLHGSETEL EITELSQLLQ 360
  361 QAGLKTHIWK AVSVDATSGE LGAMPKGVQR YLFDSKNNAG FGGTGQPFNW HLPLAHKAKA 420
  421 LLAGGLNAAN AANANAQGFY GLDFNSGLET APGIKSAEQI QTAFAQLRL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..469] PSI-BLAST 142.0 THREE-DIMENSIONAL STRUCTURE OF THE BIFUNCTIONAL ENZYME PHOSPHORIBOSYLANTHRANILATE ISOMERASE: INDOLEGLYCEROLPHOSPHATE SYNTHASE FROM ESCHERICHIA COLI REFINED AT 2.0 ANGSTROMS RESOLUTION

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • tryptophan synthase activity
    		•  3.15663465352598 bayes_pls_golite062009
  • indole-3-glycerol-phosphate synthase activity
    		•  3.12120866545322 bayes_pls_golite062009
  • catalytic activity
    		•  2.81275055404078 bayes_pls_golite062009
  • phosphoribosylanthranilate isomerase activity
    		•  2.655130814615 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  2.44001937916931 bayes_pls_golite062009
  • carboxy-lyase activity
    		•  1.80978905789979 bayes_pls_golite062009
  • lyase activity
    		•  0.9228652996943 bayes_pls_golite062009
  • imidazoleglycerol-phosphate synthase activity
    		•  0.82314869965119 bayes_pls_golite062009
  • 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]imidazole-4-carboxamide isomerase activity
    		•  0.302746738903759 bayes_pls_golite062009
  • isomerase activity
    		•  0.14149405165663 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle