YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|24348856, gi|...

General Information:
Name(s) found: gi|24374312 [NCBI NR]
gi|24348856 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|24374312|ref|NP_718355.1| 3-oxoacyl-(acyl-carrier-protein) synthase II [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24348856|gb|AAN55799.1|AE015716_9 3-oxoacyl-(acyl-carrier-protein) synthase II [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 412 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: fatty acid biosynthetic process [ISSLink to PubMed article]
    Molecular Function: 3-oxoacyl-[acyl-carrier-protein] synthase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKRRVVVTG LGLVTPVGNT VDTTWKALLS GKSGIAPITK FDASEFTTRF SGSVKDFDVE  60
   61 QYLTKKDARK MDLFIQYGMA AGIQAIQDSG LDMSKVNPGR VGTAIGAGMG GMWLIEQNHS 120
  121 ALMNGGPRKI SPFFVPSTII NMIAGHLSIM YGMTGPNFAV TTACTTGVHN IGFAARTIAY 180
  181 GDADVMVAGG AEDVTCPLGV GGFGAAKALS TRNDDPTAAS RPWDKDRDGF VIGDGAGVMV 240
  241 MEEYEHAKAR GATIYGELVG FGMSGDAFHM TSPPSDGAGA AAAMVNAVND AKLPLEKIGY 300
  301 INAHGTSTPA GDKAEAAAVK SVFGDHAYNL LVSSTKSMTG HLLGAAGAVE AIFTLLALRD 360
  361 QAVPPTINLD NPDEGCDLDF VAHTARDVKL DYALCNSFGF GGTNGSLLFK KV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..412] PSI-BLAST 129.0 Beta-ketoacyl-ACP synthase II

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transferase activity, transferring acyl groups
    		•  4.09204107606289 bayes_pls_golite062009
  • fatty acid synthase activity
    		•  3.79121338118181 bayes_pls_golite062009
  • 3-oxoacyl-[acyl-carrier-protein] synthase activity
    		•  3.71249191203055 bayes_pls_golite062009
  • C-acyltransferase activity
    		•  3.27532895419051 bayes_pls_golite062009
  • transferase activity, transferring acyl groups other than amino-acyl groups
    		•  3.14957464437124 bayes_pls_golite062009
  • acyltransferase activity
    		•  3.06879684191353 bayes_pls_golite062009
  • transferase activity
    		•  2.15834234036431 bayes_pls_golite062009
  • catalytic activity
    		•  2.14505178497871 bayes_pls_golite062009
  • acetyl-CoA C-acyltransferase activity
    		•  2.06897329929762 bayes_pls_golite062009
  • acetyl-CoA C-acetyltransferase activity
    		•  1.50839304016514 bayes_pls_golite062009
  • C-acetyltransferase activity
    		•  1.19264084089277 bayes_pls_golite062009
  • holo-[acyl-carrier-protein] synthase activity
    		•  0.800737755066121 bayes_pls_golite062009
  • fatty-acyl-CoA synthase activity
    		•  0.696028474623411 bayes_pls_golite062009
  • transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer
    		•  0.5334204157422 bayes_pls_golite062009
  • phosphotransferase activity, for other substituted phosphate groups
    		•  0.392307675469965 bayes_pls_golite062009
  • acetyltransferase activity
    		•  0.254850076259913 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle