YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: ASTB_SHEON

General Information:
Name(s) found: ASTB_SHEON [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
SHOW ALL
  • N-succinylarginine dihydrolase OS=Shewanella oneidensis (strain MR-1) GN=astB PE=3 SV=1 [Swiss-Prot]
    • Organism: Shewanella oneidensis MR-1
    Length: 444 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: arginine catabolic process [ISSLink to PubMed article]
    Molecular Function: N-succinylarginine dihydrolase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKHFEANFDG LVGPTHNYAG LSFGNVASLN NAALVSNPKA AAKQGLQKAK ALADLGMIQG  60
   61 MLAPQERPDL NTLRRIGFSG SDAQVLQQAA KTAPALLNAC CSASSMWTAN AATVSPSADT 120
  121 RDGKLHFTPA NLVDKLHRSI EPITTGRILT ATFNDPHYFY HHNHLPEHNS FGDEGAANHT 180
  181 RLCQEYGHAG VELFVYGQEA TNPHAPKPLK FPARQTLEAS MAIARLHQLE EDNCVFIQQN 240
  241 PAVIDQGVFH NDVIAVGNQN VLFYHEQAFL NTQAKLDEIK RKLDTELYFI EVPTAKVSIN 300
  301 DAVKSYLFNT QIITLPSGEM AIIAPTDCQE NPAVYAYLNE LLSLNTPIKQ VLYFDVKQSM 360
  361 QNGGGPACLR LRVAMNEREV AAVNQHTLLT DALFTRLNTW VEKHYRDRLS TEDLADPQLV 420
  421 IESRTALDEL TQIMKLGSVY PFQR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..444] PSI-BLAST 1000.0 Crystal Structure of N-Succinylarginine Dihydrolase, AstB, bound to Substrate and Product, an Enzyme from the Arginine Catabolic Pathway of Escherichia coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines
    		•  1.80356530015579 bayes_pls_golite062009
  • N-succinylarginine dihydrolase activity
    		•  1.79190392361658 bayes_pls_golite062009
  • catalytic activity
    		•  1.2603605268935 bayes_pls_golite062009
  • protein-arginine deiminase activity
    		•  1.23765841785254 bayes_pls_golite062009
  • arginine deiminase activity
    		•  1.06118411192651 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
    		•  0.89634749643842 bayes_pls_golite062009
  • hydrolase activity
    		•  0.79014898516962 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle