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View Structure Prediction Details

Protein: ASTB_SHEON
Organism: Shewanella oneidensis MR-1
Length: 444 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for ASTB_SHEON.

Description E-value Query
Range		 Subject
Range
ASTB_PSESM - N-succinylarginine dihydrolase OS=Pseudomonas syringae pv. tomato (strain DC3000) GN=astB PE=3 SV=1
ASTB_PSESM - N-succinylarginine dihydrolase OS=Pseudomonas syringae pv. tomato GN=astB PE=3 SV=1
 840.0 [0..1] [443..1]
ASTB_PSEU2 - N-succinylarginine dihydrolase OS=Pseudomonas syringae pv. syringae (strain B728a) GN=astB PE=3 SV=1
 839.0 [0..1] [443..1]
ASTB_PSEPK - N-succinylarginine dihydrolase OS=Pseudomonas putida (strain KT2440) GN=astB PE=3 SV=1
 837.0 [0..1] [444..1]
ASTB_PSE14 - N-succinylarginine dihydrolase OS=Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) GN...
 837.0 [0..1] [443..1]
ASTB_PSEP1 - N-succinylarginine dihydrolase OS=Pseudomonas putida (strain F1 / ATCC 700007) GN=astB PE=3 SV=1
 835.0 [0..1] [444..1]
ASTB_PSEF5 - N-succinylarginine dihydrolase OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=astB PE=3 ...
 834.0 [0..1] [443..1]
ASTB_PSEE4 - N-succinylarginine dihydrolase OS=Pseudomonas entomophila (strain L48) GN=astB PE=3 SV=1
gi|95111862 - gi|95111862|emb|CAK16586.1| succinylarginine dihydrolase [Pseudomonas entomophila L48]
 832.0 [0..1] [444..1]
ASTB_PSEAB - N-succinylarginine dihydrolase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=astB PE=3 SV=1
 829.0 [0..1] [443..1]
gi|107100357 - gi|107100357|ref|ZP_01364275.1| hypothetical protein PaerPA_01001382 [Pseudomonas aeruginosa PACS2]
ASTB_PSEA8 - N-succinylarginine dihydrolase OS=Pseudomonas aeruginosa (strain LESB58) GN=astB PE=3 SV=1
gi|194550237, gi... - gi|84316669|ref|ZP_00965141.1| COG3724: Succinylarginine dihydrolase [Pseudomonas aeruginosa C3719],...
ASTB_PSEAE - N-succinylarginine dihydrolase OS=Pseudomonas aeruginosa (strain ATCC 15692 / PAO1 / 1C / PRS 101 / ...
gi|254245186, gi... - gi|84322708|ref|ZP_00970792.1| COG3724: Succinylarginine dihydrolase [Pseudomonas aeruginosa 2192], ...
ASTB_PSEAE - N-succinylarginine dihydrolase OS=Pseudomonas aeruginosa GN=astB PE=3 SV=1
 828.0 [0..1] [443..1]
ASTB_PSEA7 - N-succinylarginine dihydrolase OS=Pseudomonas aeruginosa (strain PA7) GN=astB PE=3 SV=1
 827.0 [0..1] [443..1]

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Predicted Domain #1
Region A:
Residues: [1-444] 
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKHFEANFDG LVGPTHNYAG LSFGNVASLN NAALVSNPKA AAKQGLQKAK ALADLGMIQG  60
   61 MLAPQERPDL NTLRRIGFSG SDAQVLQQAA KTAPALLNAC CSASSMWTAN AATVSPSADT 120
  121 RDGKLHFTPA NLVDKLHRSI EPITTGRILT ATFNDPHYFY HHNHLPEHNS FGDEGAANHT 180
  181 RLCQEYGHAG VELFVYGQEA TNPHAPKPLK FPARQTLEAS MAIARLHQLE EDNCVFIQQN 240
  241 PAVIDQGVFH NDVIAVGNQN VLFYHEQAFL NTQAKLDEIK RKLDTELYFI EVPTAKVSIN 300
  301 DAVKSYLFNT QIITLPSGEM AIIAPTDCQE NPAVYAYLNE LLSLNTPIKQ VLYFDVKQSM 360
  361 QNGGGPACLR LRVAMNEREV AAVNQHTLLT DALFTRLNTW VEKHYRDRLS TEDLADPQLV 420
  421 IESRTALDEL TQIMKLGSVY PFQR

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Detection Method: PSI-BLAST
Confidence: 1000.0
Match: 1ynfA
Description: Crystal Structure of N-Succinylarginine Dihydrolase, AstB, bound to Substrate and Product, an Enzyme from the Arginine Catabolic Pathway of Escherichia coli
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines 1.80356530015579 bayes_pls_golite062009
N-succinylarginine dihydrolase activity 1.79190392361658 bayes_pls_golite062009
catalytic activity 1.2603605268935 bayes_pls_golite062009
protein-arginine deiminase activity 1.23765841785254 bayes_pls_golite062009
arginine deiminase activity 1.06118411192651 bayes_pls_golite062009
hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds 0.89634749643842 bayes_pls_golite062009
hydrolase activity 0.79014898516962 bayes_pls_golite062009
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