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Protein Overview: gi|24374240, gi|...

General Information:
Name(s) found: gi|24374240 [NCBI NR]
gi|24348762 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24374240|ref|NP_718283.1| prophage MuSo2, 43 kDa tail protein, putative [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24348762|gb|AAN55727.1|AE015709_10 prophage MuSo2, 43 kDa tail protein, putative [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 359 amino acids

    Gene Ontology:
    Cellular Component: provirus [TASLink to PubMed article]
    Biological Process: viral reproduction [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSEEIVLKAG GKIYQGWTKI GITRSLEAMS GAFDLEMTYK FLGNDAQYKA FIEPIKQGQA  60
   61 CTVDIGGERV ITGYVDDWVP SYDESTITIS VSGRDKTADL VDCSIDYPSG QFNNQTLTQI 120
  121 ADIVCKPFGI KVIVNTDVGE PFQRIQIEQG ETPHELLARL AKQRGVLLTS DTFGNLVITR 180
  181 ASKTKAGVSL ILGDNVKAAR GRFSWRQRFS KFTIKAAGAA HGQWDSAGLP TVGGIKADVT 240
  241 DSEIGRYRPL IIVNEEVTTA EGAAKRGQWE RQRSIGKSNM AEYTVTGWRI PQTGKLWNIN 300
  301 TLVPVIDEIM GLDEEMLIAS ILFSEDDAGR LAVISVVRPD AMDIPAQIVK DTKLGGSTW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..359] PSI-BLAST 116.0 Structure of central hub elucidated by X-ray analysis of gene product 44; baseplate component of bacteriophage Mu

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  1.179671106026 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle