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Protein Overview: KDNB_SHEON

General Information:
Name(s) found: KDNB_SHEON [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
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  • 3-deoxy-alpha-D-manno-octulosonate 8-oxidase OS=Shewanella oneidensis (strain MR-1) GN=kdnB PE=1 SV=1 [Swiss-Prot]
    • Organism: Shewanella oneidensis MR-1
    Length: 356 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: fermentation [ISSLink to PubMed article]
    Molecular Function: iron ion binding [ISSLink to PubMed article]
    alcohol dehydrogenase activity, iron-dependent [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSFKNFKVVE KMIFGRGSFV QLDDVLAAQR KADDDFVVFL VDDVHQGKPL EARIPVKAQD  60
   61 LLIWVNVDEE PSTIQIDALT EQVQAFNGKL PVSVVGLGGG STMDVAKAVS LMLTNPGGSA 120
  121 MYQGWDLIKK PAVHHIGIPT ISGTGAEASR TAVLCGPVRK LGLNSDYTVF DQIIMDSELI 180
  181 DGVETDQWFY TGMDCYIHCV ESLEGTFLNE FSKAYAEKAM DLCRQVYLED HPEKDDKLMM 240
  241 ASFMGGMSIA YSQVGACHAV SYGLSYILGY HHGIGNCIAF DVLEEFYPEG VAEFRLMMKK 300
  301 HNITLPKNIC KDLPDETIAK MVAVTKSMGP LWANVYGPTW EEKVTDEMLT ALFRRI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..356] PSI-BLAST 75.0 Crystal Structure of Lactaldehyde reductase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • alcohol dehydrogenase (NAD) activity
    		•  4.20847254363796 bayes_pls_golite062009
  • alcohol dehydrogenase activity, iron-dependent
    		•  3.92605598906232 bayes_pls_golite062009
  • oxidoreductase activity
    		•  2.97854088186835 bayes_pls_golite062009
  • catalytic activity
    		•  2.74401602170192 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  2.4403567544219 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  1.78438115520218 bayes_pls_golite062009
  • 3-chloroallyl aldehyde dehydrogenase activity
    		•  1.22223073730111 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.91

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle