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Protein Overview: gi|24348395, gi|...

General Information:
Name(s) found: gi|24373957 [NCBI NR]
gi|24348395 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24373957|ref|NP_718000.1| phosphoserine aminotransferase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24348395|gb|AAN55444.1|AE015681_8 phosphoserine aminotransferase [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 367 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: pyridoxine biosynthetic process [ISSLink to PubMed article]
    L-serine biosynthetic process [ISSLink to PubMed article]
    Molecular Function: O-phospho-L-serine:2-oxoglutarate aminotransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVSAIYNFC AGPAMLPAAV MKKAQQELLD WNGLGVSVME VSHRGKEFIA LTKQAEADLR  60
   61 ELMHIPQNYH VLFMHGGGRG QFSAVVNNFL GNQGRALYLV SGQWSSAALA EAQKLAGDAQ 120
  121 IDSLNIVEKH NCLNAVVLPD LHKIDADYRY VHYCPNETVD GIEIFDELDS PWPIVADLSS 180
  181 TIMSREIDVS RYGLIYAGAQ KNIGPSGLSI VIVRDDMLTL PSLPQSSIMD YRLAVEHDSM 240
  241 FNTPPTFAWY LAAEVFAWLK SIGGVASIAK INQQKAQMLY ACIDANPFYK NGVVAANRSQ 300
  301 MNVTFQLADE SLDGAFLKEA EAVGLVALKG HRIVGGMRAS LYNAMPLEGV AALVTFMNEF 360
  361 AAKHYNI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..367] PSI-BLAST 60.39794 Phosphoserine aminotransferase, PSAT

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.29878871754893 bayes_pls_golite062009
  • O-phospho-L-serine:2-oxoglutarate aminotransferase activity
    		•  2.1692959843619 bayes_pls_golite062009
  • glycine dehydrogenase (decarboxylating) activity
    		•  1.80372125032222 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, disulfide as acceptor
    		•  1.80372125032222 bayes_pls_golite062009
  • transferase activity
    		•  1.44093490824786 bayes_pls_golite062009
  • 5-aminolevulinate synthase activity
    		•  1.42214433786345 bayes_pls_golite062009
  • transferase activity, transferring nitrogenous groups
    		•  1.28316822767388 bayes_pls_golite062009
  • transaminase activity
    		•  1.24990480711889 bayes_pls_golite062009
  • L-aspartate:2-oxoglutarate aminotransferase activity
    		•  0.81652984148807 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.636782746250952 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.526698053525422 bayes_pls_golite062009
  • DNA binding
    		•  0.516618701017633 bayes_pls_golite062009
  • binding
    		•  0.450641761940864 bayes_pls_golite062009
  • structural molecule activity
    		•  0.347975812448725 bayes_pls_golite062009
  • glycine hydroxymethyltransferase activity
    		•  0.271623203801431 bayes_pls_golite062009
  • transcription factor activity
    		•  0.188693175079415 bayes_pls_golite062009
  • pyridoxal phosphate binding
    		•  0.16957228630576 bayes_pls_golite062009
  • vitamin B6 binding
    		•  0.16957228630576 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.67

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle