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Protein Overview: gi|24348063, gi|...

General Information:
Name(s) found: gi|24373700 [NCBI NR]
gi|24348063 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24373700|ref|NP_717743.1| transposase, putative [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24348063|gb|AAN55187.1|AE015656_4 transposase, putative [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 343 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: transposition, DNA-mediated [ISSLink to PubMed article]
    Molecular Function: transposase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAILPPLCRA ERKQLQKLLH KTKDKHFARR LIAMLMLHQG QSITDVHHAT GAARSSIGRW  60
   61 LAWYTESGVD GLKSLTLGRP AILPIDPILL CLSLLIQLCP QDFGYQRSRW SSELLAMVIN 120
  121 AQLKLSIAAS TVHRLLPKAG IVWRRSAPTL RIKDPHQDEK MAEINQALEQ CCVEHPVFYE 180
  181 DEVDIDLNPK IGADWMPKGQ QKRVVTPGNN RKHYIAGALH ASTGKVLYVS SDSKASELFI 240
  241 AMLEKLKRHY RKAKTITLIL DNYIIHKSRK TVAWLKHNPK FRLLFQPVYS PWVNKIERLW 300
  301 LALHETVTRN HACRNMRELL GMVWHFMGTV SPFPGSGHGT AKM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..148] PSI-BLAST 6.0 Paired protein (prd)
    2 View Details [149..343] PSI-BLAST 4.522879 No description for 2f7tA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  1.76956337706487 bayes_pls_golite062009
  • DNA binding
    		•  1.58100039759954 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.46839493313894 bayes_pls_golite062009
  • binding
    		•  1.095333525217 bayes_pls_golite062009
  • transcription factor activity
    		•  1.0707787742149 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.50

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle