| Protein: | gi|24348063, gi|... |
| Organism: | Shewanella oneidensis MR-1 |
| Length: | 343 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|24348063, gi|....
| Description | E-value | Query Range |
Subject Range |
|
|
174.0 | [0..1] | [343..1] |
|
|
173.0 | [0..1] | [343..1] |
|
Region A: Residues: [1-148] |
1 11 21 31 41 51
| | | | | |
1 MAILPPLCRA ERKQLQKLLH KTKDKHFARR LIAMLMLHQG QSITDVHHAT GAARSSIGRW 60
61 LAWYTESGVD GLKSLTLGRP AILPIDPILL CLSLLIQLCP QDFGYQRSRW SSELLAMVIN 120
121 AQLKLSIAAS TVHRLLPKAG IVWRRSAP
|
| Detection Method: |  |
| Confidence: | 6.0 |
| Match: | 1pdnC |
| Description: | Paired protein (prd) |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| transcription regulator activity | 1.76956337706487 | bayes_pls_golite062009 |
| DNA binding | 1.58100039759954 | bayes_pls_golite062009 |
| nucleic acid binding | 1.46839493313894 | bayes_pls_golite062009 |
| binding | 1.095333525217 | bayes_pls_golite062009 |
| transcription factor activity | 1.0707787742149 | bayes_pls_golite062009 |
|
Region A: Residues: [149-343] |
1 11 21 31 41 51
| | | | | |
1 TLRIKDPHQD EKMAEINQAL EQCCVEHPVF YEDEVDIDLN PKIGADWMPK GQQKRVVTPG 60
61 NNRKHYIAGA LHASTGKVLY VSSDSKASEL FIAMLEKLKR HYRKAKTITL ILDNYIIHKS 120
121 RKTVAWLKHN PKFRLLFQPV YSPWVNKIER LWLALHETVT RNHACRNMRE LLGMVWHFMG 180
181 TVSPFPGSGH GTAKM
|
| Detection Method: | |
| Confidence: | 4.522879 |
| Match: | 2f7tA |
| Description: | No description for 2f7tA was found. |
