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Protein Overview: SUCC_SHEON

General Information:
Name(s) found: SUCC_SHEON [Swiss-Prot]
Description(s) found:
Found 6 descriptions.
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  • Succinyl-CoA ligase [ADP-forming] subunit beta OS=Shewanella oneidensis (strain MR-1) GN=sucC PE=3 SV=1 [Swiss-Prot]
    • Organism: Shewanella oneidensis MR-1
    Length: 388 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: tricarboxylic acid cycle [ISSLink to PubMed article]
    Molecular Function: succinate-CoA ligase (ADP-forming) activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLHEYQAKS LFAEYGLPVS EGFACDTAQE AVEAAGRIGG NLWVVKCQVH AGGRGKAGGV  60
   61 KVTGDKEEIR AFAEYWLGKN LVTYQTDEKG QPVAKILVES CTDIANELYL GAVVDRATRR 120
  121 VVFMASTEGG VEIEKVAEET PELIHKAIID PLTGPQPFQA RDLGFKLGLN PTQMKQFTKI 180
  181 FMGLATMFVD HDFALLEINP LVITTEGNLH CLDGKIGIDG NALFRQPKIK AMHDPSQDDA 240
  241 REAHAAMFEL NYVALDGNVG CMVNGAGLAM GTMDIVNLHG GKPANFLDVG GGATKERVAE 300
  301 AFKIILSDSN VKAVLVNIFG GIVRCDMIAE GIIGAVKEVG VKVPVVVRLE GTNAELGREV 360
  361 LAKSGLDIIA ANSLTDAAEL VVKAAEGK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..388] PSI-BLAST 91.045757 Succinyl-CoA synthetase, beta-chain, C-terminal domain; Succinyl-CoA synthetase, beta-chain, N-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • succinate-CoA ligase (GDP-forming) activity
    		•  9.38156037766008 bayes_pls_golite062009
  • succinate-CoA ligase activity
    		•  9.37213380498009 bayes_pls_golite062009
  • CoA-ligase activity
    		•  8.19630272128785 bayes_pls_golite062009
  • acid-thiol ligase activity
    		•  7.98453115335343 bayes_pls_golite062009
  • succinate-CoA ligase (ADP-forming) activity
    		•  7.27105019329796 bayes_pls_golite062009
  • ligase activity, forming carbon-sulfur bonds
    		•  7.23103788464777 bayes_pls_golite062009
  • ligase activity
    		•  3.25077459445999 bayes_pls_golite062009
  • ATP citrate synthase activity
    		•  3.09252003125984 bayes_pls_golite062009
  • transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer
    		•  3.07329302783164 bayes_pls_golite062009
  • catalytic activity
    		•  2.5009559386228 bayes_pls_golite062009
  • CoA carboxylase activity
    		•  1.75094739650292 bayes_pls_golite062009
  • ligase activity, forming carbon-carbon bonds
    		•  1.59015373957506 bayes_pls_golite062009
  • acetyl-CoA carboxylase activity
    		•  1.29064883699349 bayes_pls_golite062009
  • transferase activity, transferring acyl groups
    		•  1.15639517822408 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
    		•  0.992008268375695 bayes_pls_golite062009
  • binding
    		•  0.346654244533873 bayes_pls_golite062009
  • biotin carboxylase activity
    		•  0.0172732430077291 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle