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Protein Overview: gi|24372934, gi|...

General Information:
Name(s) found: gi|24372934 [NCBI NR]
gi|24347070 [NCBI NR]
Description(s) found:
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  • gi|24372934|ref|NP_716976.1| signal recognition particle protein [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24347070|gb|AAN54421.1|AE015579_10 signal recognition particle protein Ffh [Shewanella oneidensis MR-1] [NCBI NR]
  • signal recognition particle protein Ffh [Shewanella oneidensis MR-1]gi|24347070|gb|AAN54421.1| signal recognition particle protein Ffh [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • signal recognition particle protein Ffh [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 457 amino acids

    Gene Ontology:
    Cellular Component: signal recognition particle, plasma membrane targeting [ISSLink to PubMed article]
    Biological Process: protein secretion [ISSLink to PubMed article]
    Molecular Function: GTPase activity [ISSLink to PubMed article]
    signal sequence binding [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFENLTDRLS RTLKNISGRG RLTEENVKET LREVRMALLE ADVALPVVRE FVNNVKERAV  60
   61 GQEVAKSLSP GQAFIKIVQS ELEKSMGEAN QALDLATQPP AVVMMAGLQG AGKTTSVAKL 120
  121 GKLLRTRHKK SVLVVSADVY RPAAIKQLET LATEVDVEFF PSDVSQKPID IAKAAIAHAK 180
  181 LKFIDVVILD TAGRLHVDEA MMDEIKALHA ALKPIETLFV VDAMTGQDAA NTAKAFNEAL 240
  241 PLTGVILTKV DGDARGGAAL SIRHITGKPI KFLGVGEKTD ALEPFHPDRI ASRILGMGDV 300
  301 LSLIEEVERG VDKEKAMKLA SKVKQGGSFD LEDFREQLQQ MKNMGGMMSM IEKLPGVGQL 360
  361 PPDALAQIQD GKMTRQMEAI INSMTAKERK NPDLIKGSRK RRIAAGSGTE IQDVNRLLKQ 420
  421 FTQMQKMMKK MSAKGGMQKM MRGMRGMMPG GMKFPGR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..457] PSI-BLAST 127.0 No description for 2j289 was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle