General Information: |
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Name(s) found: |
gi|24372920
[NCBI NR]
gi|24347052 [NCBI NR] |
Description(s) found:
SHOW ONLY BEST |
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Organism: | Shewanella oneidensis MR-1 |
Length: | 192 amino acids |
Gene Ontology: |
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Cellular Component: | NONE FOUND |
Biological Process: |
response to oxidative stress
[ISS![]() response to heat [ISS ![]() transcription initiation [ISS ![]() |
Molecular Function: |
sigma factor activity
[ISS![]() |
Sequence: |
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Sequence: [PDR BLAST] [ProtParam] |
1 11 21 31 41 51 | | | | | | 1 MSGQISDQQL VERVQRGDKN AFNLLVLKYQ SKVISLISRY VRNQADVTDV AQEAFIKAYR 60 61 ALPNFRGESA FYTWLYRIAV NTAKNYLVSQ GRRAPANDVD AEDAEYYEGS DALKEFASPE 120 121 RLMLSDEIKK VVFETLETLP EELRMAISLR ELDGMSYEDI AIIMDCPVGT VRSRIFRARE 180 181 AIDKKLQPLL EE |
SHOWING SINGLE HITS. [ Hide Single Hits ]
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Domains predicted:
# | Region(s) | Method | Confidence | Match Description | |
1 | View Details | [1..192] | ![]() |
36.522879 | SigmaE factor (RpoE) |
Functions predicted (by domain):
# | Gene Ontology predictions | |||||||||||||||
1 |
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Protein predicted to be: | GLOBULAR (No transmembrane regions or signal peptide) |
Confidence of classification: | 0.99 |
Source: Reynolds et al. (2008)