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Protein Overview: gi|24372919, gi|...

General Information:
Name(s) found: gi|24372919 [NCBI NR]
gi|24347051 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|24372919|ref|NP_716961.1| L-aspartate oxidase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24347051|gb|AAN54406.1|AE015578_6 L-aspartate oxidase [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 537 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: pyridine nucleotide biosynthetic process [ISSLink to PubMed article]
    Molecular Function: L-aspartate oxidase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQVVEHQSD ILVIGSGAAG LTLALHLAEK ANVILLSKGP LSEGSTYYAQ GGIASVFDES  60
   61 DTIESHVADT LVAGAGLCDK DVVTFTAENA KSAMQWLIEC GVAFDKEEAA GNNPKDAPYH 120
  121 LTREGGHSHR RILHAADATG KEVQTTLQER ALDHPNIQVL ERYNAIDLIT TRKLNRPGNR 180
  181 VLGAYVWNRN AEQVETIKAK FVALATGGSS KVYQYTSNPD VASGDGIAMA WRAGCRVANM 240
  241 EFNQFHPTCL YHADARNFLL TEALRGEGAY LRRPDGSRFM PDFDERAELA PRDIVARAID 300
  301 YEMKRLGADC VYLDISHKDA DFVMKHFPTI YSRCLELGID ITKDAIPVVP AAHYTCGGVM 360
  361 TDLHGQTDLN GLYAIGEVAY TGLHGANRLA SNSLLECLVF ARAASEDIES QLHKIPLPGL 420
  421 IPAWDESKVS NSDEEVVIAH NWHELRLFMW DYVGIVRSDK RLERALRRCL MLQQEIQEYY 480
  481 SNFRVSNNLL ELRNLVQVAE LIIRCAMDRK ESRGLHYNID HPEKLDSPLP TILQPEK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..537] PSI-BLAST 122.0 L-aspartate oxidase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • succinate dehydrogenase activity
    		•  10.1355816274563 bayes_pls_golite062009
  • succinate dehydrogenase (ubiquinone) activity
    		•  8.87698547678677 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor
    		•  8.87698547678677 bayes_pls_golite062009
  • L-aspartate oxidase activity
    		•  7.97437641217089 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-CH group of donors
    		•  7.4746833070215 bayes_pls_golite062009
  • aspartate oxidase activity
    		•  7.32727957948448 bayes_pls_golite062009
  • oxidoreductase activity
    		•  6.1068533307878 bayes_pls_golite062009
  • oxidoreductase activity, acting on NADH or NADPH
    		•  5.74880353813045 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor
    		•  5.00880700655468 bayes_pls_golite062009
  • NADPH-adrenodoxin reductase activity
    		•  3.86336671540719 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  2.57282017498189 bayes_pls_golite062009
  • electron carrier activity
    		•  2.50633692682151 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  2.50603438449246 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  2.28982462439281 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors, NAD or NADP as acceptor
    		•  2.26549080531565 bayes_pls_golite062009
  • oxygen-dependent protoporphyrinogen oxidase activity
    		•  2.16428165652808 bayes_pls_golite062009
  • dihydrolipoyl dehydrogenase activity
    		•  1.91979117253135 bayes_pls_golite062009
  • catalytic activity
    		•  1.75556359035561 bayes_pls_golite062009
  • oxidoreductase activity, acting on sulfur group of donors
    		•  1.18990628739838 bayes_pls_golite062009
  • antioxidant activity
    		•  1.12347155061135 bayes_pls_golite062009
  • binding
    		•  0.98506692548414 bayes_pls_golite062009
  • transporter activity
    		•  0.890824576391732 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-NH2 group of donors
    		•  0.798505263716232 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.706117386114413 bayes_pls_golite062009
  • ferredoxin reductase activity
    		•  0.61713057030514 bayes_pls_golite062009
  • oxidoreductase activity, acting on iron-sulfur proteins as donors, NAD or NADP as acceptor
    		•  0.61713057030514 bayes_pls_golite062009
  • ferredoxin-NADP+ reductase activity
    		•  0.61713057030514 bayes_pls_golite062009
  • FAD binding
    		•  0.503028015880333 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  0.491481205015383 bayes_pls_golite062009
  • succinate-CoA ligase activity
    		•  0.468246082354334 bayes_pls_golite062009
  • coenzyme binding
    		•  0.44036421821989 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.26114823844682 bayes_pls_golite062009
  • protein binding
    		•  0.159209309982354 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.53

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle