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Protein Overview: gi|24346986, gi|...

General Information:
Name(s) found: gi|24372871 [NCBI NR]
gi|24346986 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24372871|ref|NP_716913.1| dihydroneopterin aldolase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24346986|gb|AAN54358.1|AE015573_5 dihydroneopterin aldolase [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 116 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: folic acid and derivative metabolic process [ISSLink to PubMed article]
    Molecular Function: dihydroneopterin aldolase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDKVLIRQLR IDTVIGVYEW EKNIHQSLFL DLDMAWDNRP AAATDDYQYA LCYETVSNRL  60
   61 TKLVTEKPIE LIETVAERVA ECLLSEFKVS WVKVVVMKPG AVPSASSVGV EIERSR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..116] PSI-BLAST 32.09691 1.65 ANGSTROM RESOLUTION STRUCTURE OF 7,8-DIHYDRONEOPTERIN ALDOLASE FROM STAPHYLOCOCCUS AUREUS

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • GTP cyclohydrolase I activity
    		•  4.32142445441644 bayes_pls_golite062009
  • cyclohydrolase activity
    		•  4.12134839958676 bayes_pls_golite062009
  • GTP cyclohydrolase activity
    		•  3.76376266092452 bayes_pls_golite062009
  • catalytic activity
    		•  2.57832156213163 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
    		•  2.13367928146634 bayes_pls_golite062009
  • dihydroneopterin aldolase activity
    		•  2.05627605013559 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds
    		•  1.46072575729571 bayes_pls_golite062009
  • 6-pyruvoyltetrahydropterin synthase activity
    		•  0.11818000438771 bayes_pls_golite062009
  • lyase activity
    		•  0.0597333135477298 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle