YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|24372858, gi|...

General Information:
Name(s) found: gi|24372858 [NCBI NR]
gi|24346966 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|24372858|ref|NP_716900.1| proton-dependent oligopeptide transporter (POT) family protein [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24346966|gb|AAN54345.1|AE015571_8 proton-dependent oligopeptide transporter (POT) family protein [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 516 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: oligopeptide transport [ISSLink to PubMed article]
    Molecular Function: proton-dependent oligopeptide secondary active transmembrane transporter activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTLGTNQVSK THSFMTVSLI ELWERFGYYG MQALIVYFMV QRLGFDDSRA NLVWSACAAL  60
   61 IYVSPAIGGW VGDKILGTKR TMLLGAGILS VGYALMTVPT ENTWFMFSAL GVIVVGNGLF 120
  121 KPNAGNLVRK IYEGDDSKID SAFTIYYMAV NVGSTFSMLL TPWIKDYVNA QYGNEFGWHA 180
  181 AFAVCCVGIL VGLGNYALMH KSLANYGSEP DTRPVNKKSL AIVLALAALS VVASAIILEY 240
  241 EDVARVFVYA AGVAVLGIFF HLIRTSEPSE RAGLIAALIL TVQTVFFFIF YQQMSTSLAL 300
  301 FALRNVDWDF QVFGTHLWTW SPAQFQALNP IWIMVLSPVL AWSYSWAGRN NKDFSIAAKF 360
  361 ALGFAVVAIG FFIYGFAGQF AVNGKTSSWV MIWGYASYSL GELLVSGLGL AMIARYVPAR 420
  421 MGGFMMGAYF VASGISQYLG GVVANFASVP QDLVDPLQTL PVYTNLFNKL GVAAVVCTII 480
  481 ALAVLPLMRR LTESHHAHSS IENNAAASLR DVKAEQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..516] PSI-BLAST 12.39794 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transporter activity
    		•  4.09176719149278 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.59744164024479 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  3.5865018981083 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  3.54194478414824 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  2.21266150105753 bayes_pls_golite062009
  • organic acid transmembrane transporter activity
    		•  2.15783210522667 bayes_pls_golite062009
  • cation transmembrane transporter activity
    		•  1.79369588808394 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  1.59419818573076 bayes_pls_golite062009
  • secondary active transmembrane transporter activity
    		•  1.22264637452409 bayes_pls_golite062009
  • binding
    		•  1.05701989682533 bayes_pls_golite062009
  • polyol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • alcohol transmembrane transporter activity
    		•  0.924836669821548 bayes_pls_golite062009
  • glycerol transmembrane transporter activity
    		•  0.812001619402678 bayes_pls_golite062009
  • symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • solute:cation symporter activity
    		•  0.74591237387473 bayes_pls_golite062009
  • cation:sugar symporter activity
    		•  0.143419068761182 bayes_pls_golite062009
  • sugar:hydrogen symporter activity
    		•  0.143419068761182 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle