YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|24372849, gi|...

General Information:
Name(s) found: gi|24372849 [NCBI NR]
gi|24346954 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|24372849|ref|NP_716891.1| glutamine synthetase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24346954|gb|AAN54336.1|AE015570_10 glutamine synthetase [Shewanella oneidensis MR-1] [NCBI NR]
  • glutamine synthetase [Shewanella oneidensis MR-1]gi|24346954|gb|AAN54336.1| glutamine synthetase [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas]
  • glutamine synthetase [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
    • Organism: Shewanella oneidensis MR-1
    Length: 451 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: nitrogen compound metabolic process [ISSLink to PubMed article]
    Molecular Function: glutamate-ammonia ligase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKLIAFLKE RKITEVECVI CDMTGIARGK IAPVDKFLDE KGMRLPESVL LQTVTGDFVD  60
   61 DDIYYSLLDD ADIDFVCVPD ENAVFMLPWT IEATAQVIHD CYDRMGNPIE LSPRNVLKKV 120
  121 LSLYDEKGWE PVIAPEMEFY LTSRSDDHDL PLKPPIGRSG RPEAGRQSFS IDAANEYDPL 180
  181 FEDMYDWCEI QGLDIDTLIH EDGPAQMEIN FSHGNPLSLA DQVFVFKRTL REAALKHNVC 240
  241 ATFMAKPVTD EPGSAMHIHQ SVINKETGKN IFTNEDGTQS ALFLSYIAGL QKYIPEFLPL 300
  301 MAPNANSFRR FLPGTSAPVN LEWGIENRTC GLRIPESSPQ NRRIENRIPG ADANCYLAFA 360
  361 AGLLCGYIGM VEGLKPSTPV QGKANESRSN NPHCLPLTLE EALVAMEESD ACKEYLGESF 420
  421 TTGFVAVKQA ELENFRRVVS SWEREFLLLS V

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..451] PSI-BLAST 139.0 Glutamine synthetase, N-terminal domain; Glutamine synthetase, C-terminal domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • ammonia ligase activity
    		•  6.27241182807427 bayes_pls_golite062009
  • acid-ammonia (or amide) ligase activity
    		•  5.91942691148686 bayes_pls_golite062009
  • ligase activity
    		•  1.27889290664771 bayes_pls_golite062009
  • catalytic activity
    		•  1.08973967683802 bayes_pls_golite062009
  • ligase activity, forming carbon-nitrogen bonds
    		•  0.0373860162850559 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.81

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle