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Protein Overview: gi|24372839, gi|...

General Information:
Name(s) found: gi|24372839 [NCBI NR]
gi|24346941 [NCBI NR]
Description(s) found:
Found 4 descriptions.
SHOW ALL
  • gi|24372839|ref|NP_716881.1| adenylosuccinate synthetase, putative [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24346941|gb|AAN54326.1|AE015569_12 adenylosuccinate synthetase, putative [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 418 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: purine ribonucleotide biosynthetic process [ISSLink to PubMed article]
    Molecular Function: adenylosuccinate synthase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPSIVVVGAN WGDEGKGRIV DYLAADAAAS VRFQGGNNAG HTVVNDYGTF KLHQLPSGIF  60
   61 NPNCVAVLGP GMVISPEKLS VEIAEVEAAG IEVKLCISDR ATLCLPIHAL EDTLEEQRLG 120
  121 DLAYGSTRQG IAPAYGDRVM KKGILVGWLK QPEVLQERIQ FMLNWKLPQL KALYPSCDFS 180
  181 QTAAEMTQWL LDVTAPWRPF ICNVTEPLKA LQKQDANLLF EAQLGAGRDL IYGEYPYTTS 240
  241 SNVTAAFAGL GSGLPALRPE RVIAVAKAFS SSVGTGTLVT AMEEQDDFRK NANEFGATTG 300
  301 RPRDMGYFDA VATRNGVELQ AATEIALTKI DCLTGMKDLK ICIAYEGEHT ENPIWPQTAA 360
  361 LSPVYEQMES WSEDITTCRT FESLPKAAQH YVERIEALMG VRVSMVSVGP ERDQMIIR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..418] PSI-BLAST 1000.0 Adenylosuccinate synthetase, PurA

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • nucleobase, nucleoside, nucleotide kinase activity
    		•  3.66392587433723 bayes_pls_golite062009
  • binding
    		•  2.64537357529343 bayes_pls_golite062009
  • nucleotide kinase activity
    		•  2.24094813695083 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.11222585187695 bayes_pls_golite062009
  • phosphotransferase activity, phosphate group as acceptor
    		•  1.96697952975573 bayes_pls_golite062009
  • DNA binding
    		•  1.7904783386531 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.68903321260301 bayes_pls_golite062009
  • hydrogen ion transporting ATP synthase activity, rotational mechanism
    		•  1.24165037431695 bayes_pls_golite062009
  • purine ribonucleotide binding
    		•  1.1110976601505 bayes_pls_golite062009
  • ribonucleotide binding
    		•  1.11103644113672 bayes_pls_golite062009
  • purine nucleotide binding
    		•  1.1086792521709 bayes_pls_golite062009
  • nucleotide binding
    		•  1.1060655022247 bayes_pls_golite062009
  • catalytic activity
    		•  1.00104173493322 bayes_pls_golite062009
  • ATP binding
    		•  0.80197288940364 bayes_pls_golite062009
  • adenyl ribonucleotide binding
    		•  0.770085840885632 bayes_pls_golite062009
  • adenyl nucleotide binding
    		•  0.751575230566049 bayes_pls_golite062009
  • transcription factor activity
    		•  0.603758349693077 bayes_pls_golite062009
  • adenylate kinase activity
    		•  0.447752711852745 bayes_pls_golite062009
  • kinase activity
    		•  0.431162005044036 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  0.396187998943318 bayes_pls_golite062009
  • translation regulator activity
    		•  0.29096092258568 bayes_pls_golite062009
  • hydrogen ion transmembrane transporter activity
    		•  0.277694966071518 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
    		•  0.274994961137851 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  0.250756824614616 bayes_pls_golite062009
  • protein binding
    		•  0.170837278876362 bayes_pls_golite062009
  • monovalent inorganic cation transmembrane transporter activity
    		•  0.126821629333317 bayes_pls_golite062009
  • helicase activity
    		•  0.0775311459068899 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle