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Protein Overview: COBT_SHEON

General Information:
Name(s) found: COBT_SHEON [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
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  • Nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase OS=Shewanella oneidensis (strain MR-1) GN=cobT PE=3 SV=1 [Swiss-Prot]
    • Organism: Shewanella oneidensis MR-1
    Length: 350 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: cobalamin biosynthetic process [ISSLink to PubMed article]
    Molecular Function: nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSQSSLSFQI EPVSKAQDQV IQQKIDLKTK PPGALGMLES LALQIARIQG PQQLQIVKPT  60
   61 MLVFAGDHGI AAEGVSIAPS EVTHQMVQNF AEGGAAINVF CRQLGLTLEV IDCGILTPVE 120
  121 GVEGIIDQRL GAGTGAIHLE PAMSLDCVDK GFAMARELIE RHHQAGCNLV AFGEMGIGNT 180
  181 SSAAAIMAAI MQLEVADCVG RGTGINSETL ARKLTLVELA LLSHQSAMTG PKQVLACLGG 240
  241 FEIVQMTGAM LAAAERKMLV VVDGFIATAA ALVAVTINAN VRDYLIFAHR SEEQGHQRML 300
  301 EHLQAKPLLS LGLRLGEGTG AALALPLIQA AANFYNQMAS FSDAGIEAVV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..350] PSI-BLAST 99.0 Nicotinate mononucleotide:5,6-dimethylbenzimidazole phosphoribosyltransferase (CobT)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • nicotinate-nucleotide-dimethylbenzimidazole phosphoribosyltransferase activity
    		•  6.11307440325985 bayes_pls_golite062009
  • transferase activity, transferring pentosyl groups
    		•  2.4037591171855 bayes_pls_golite062009
  • catalytic activity
    		•  2.05174935916901 bayes_pls_golite062009
  • transferase activity
    		•  1.06150708725398 bayes_pls_golite062009
  • transferase activity, transferring glycosyl groups
    		•  0.819573960721987 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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