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Protein Overview: gi|24372287, gi|...

General Information:
Name(s) found: gi|24372287 [NCBI NR]
gi|24346217 [NCBI NR]
Description(s) found:
Found 5 descriptions.
SHOW ALL
  • gi|24372287|ref|NP_716329.1| thiol:disulfide interchange protein precursor [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24346217|gb|AAN53774.1|AE015515_7 thiol:disulfide interchange protein DsbD [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 610 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: cytochrome complex assembly [ISSLink to PubMed article]
    protein thiol-disulfide exchange [ISSLink to PubMed article]
    Molecular Function: catalytic activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKLLSLTFT ALLLLAPLAL SGNAFANNFG FLKSEPELMP VDQAFAFDFK QEGNKVTLNW  60
   61 VIADGYYMYR DKLKFSVNGA ELGTIDLPKG KPHNDEYFGE QEVYYTYIDI PVGLKQADDN 120
  121 GTLSVTFMGC AEGKLCYPPT KRDVSLKAVA ANDGQIATTA ASDATEPVTA QTNANSATNA 180
  181 PITQQDSLSQ MLSNDSLLWT LVIFFGLGIG LALTPCVFPM YPILSGIIVG QGQKLSTAKA 240
  241 FTLSMAYVQG MAITYSILGL VVASAGMKYQ AALQHPAVLV VLAILFFVLS LSMFGLYDLK 300
  301 LPSRFQEKMN SISNNQKGGN LIGVFLMGVI SGLVASPCTT APLSGALVYV AQTGDLLQGF 360
  361 LALYVLSMGM GVPLLIIGTS GGKLLPRAGA WMNIIKTVFG FLLIAVSIVM LGRIWTGVVS 420
  421 DVLWSLWGIS FTGYLMHQNK LSAFNWKQTV RSVLLMLTLL ASFSYGFQAV MGHFGFNHSP 480
  481 VGNTATAEAE HGFKHIKSIE DLDRELAAAT AAGKPVMLDL YADWCVACKE FEAITFKDAE 540
  541 VLARMNKIVL LQADVTKSDA VDVALLEKYH VLGLPTLLMF NEQGEPREDL RVTGFMGPKE 600
  601 FAAHLDHLVK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..159] PSI-BLAST 46.39794 Thiol:disulfide interchange protein DsbD, N-terminal domain (DsbD-alpha)
    2 View Details [160..416] MSA 5.57399 View MSA. No confident structure predictions are available.
    3 View Details [417..481] deduced N/A No confident structure predictions are available.
    4 View Details [482..610] PSI-BLAST 22.69897 No description for 2fweA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • protein disulfide isomerase activity
    		•  2.18896015535195 bayes_pls_golite062009
  • intramolecular oxidoreductase activity, transposing S-S bonds
    		•  2.18896015535195 bayes_pls_golite062009
  • intramolecular oxidoreductase activity, interconverting keto- and enol-groups
    		•  2.02338373977612 bayes_pls_golite062009
  • catalytic activity
    		•  0.60409960326459 bayes_pls_golite062009
  • isomerase activity
    		•  0.121577597676249 bayes_pls_golite062009
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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