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Protein Overview: gi|24372285, gi|...

General Information:
Name(s) found: gi|24372285 [NCBI NR]
gi|24346215 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24372285|ref|NP_716327.1| galactokinase [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24346215|gb|AAN53772.1|AE015515_5 galactokinase [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 381 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: galactose metabolic process [ISSLink to PubMed article]
    Molecular Function: galactokinase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNPAQRATK LFVQTFGTKA DDLYQAPGRV NLIGEYTDYN DGFVLPAAIN FHTVIAVKRR  60
   61 EDSKFRAVAD AFPGQIKEWT FGKETEIHPE DGWVNYLKGF TAAMANTGLI AKGLDLAVVG 120
  121 DVPLAAGLSS SGALVVAFGT AISDSSQLHL SPMAVAQLAQ RGEYRYVASA CSIMDHMVCA 180
  181 MGEPDHALLI DCLDLDSEAI AIPENLSLII IDAHIEKQRL ATISQQRREE CAQAAEFFGL 240
  241 DALRHLDLRQ LESAKNKLDE TLYRRAKHVV TENKRTQSAA RALEQNNISK FSLLMAQSHQ 300
  301 SLRDDFEVTL PEFDTLVDIV SQVIGERGGI RMTDGCVVAL VDHELTDAVV SAVEQAFFEQ 360
  361 TGIDATVYLC SASSGAGRID S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..381] PSI-BLAST 85.69897 crystal structure of human galactokinase complexed with MgAMPPNP and galactose

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • phosphotransferase activity, alcohol group as acceptor
    		•  2.57444343595083 bayes_pls_golite062009
  • kinase activity
    		•  2.45533953107206 bayes_pls_golite062009
  • transferase activity, transferring phosphorus-containing groups
    		•  2.15678581504347 bayes_pls_golite062009
  • galactokinase activity
    		•  1.98579505313408 bayes_pls_golite062009
  • transferase activity
    		•  1.44847475955289 bayes_pls_golite062009
  • galactose binding
    		•  1.09822999475915 bayes_pls_golite062009
  • ribonuclease activity
    		•  0.861708516886368 bayes_pls_golite062009
  • catalytic activity
    		•  0.836142537655721 bayes_pls_golite062009
  • binding
    		•  0.81933081762145 bayes_pls_golite062009
  • nuclease activity
    		•  0.750627453499812 bayes_pls_golite062009
  • hydrolase activity
    		•  0.740929677099368 bayes_pls_golite062009
  • 3'-5'-exoribonuclease activity
    		•  0.29372632468704 bayes_pls_golite062009
  • exoribonuclease activity
    		•  0.268974873769861 bayes_pls_golite062009
  • protein binding
    		•  0.252740644591197 bayes_pls_golite062009
  • exoribonuclease activity, producing 5'-phosphomonoesters
    		•  0.24527927280502 bayes_pls_golite062009
  • carbohydrate kinase activity
    		•  0.236567582613739 bayes_pls_golite062009
  • structural constituent of ribosome
    		•  0.168901349358066 bayes_pls_golite062009
  • peptidase activity
    		•  0.14842914604274 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.62

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle