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Protein Overview: gi|24372011, gi|...

General Information:
Name(s) found: gi|24372011 [NCBI NR]
gi|24345872 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24372011|ref|NP_716053.1| type IV pilus biogenesis protein PilC [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24345872|gb|AAN53498.1|AE015489_11 type IV pilus biogenesis protein PilC [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 423 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: pilus assembly [ISSLink to PubMed article]
    protein secretion by the type II secretion system [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATATTVKKP RPKKIEQKSQ PKIYTFEWKG VNRDGQKTSG ELRGASAAEI RSQLKSQGVN  60
   61 PKTVRKQSAA LFKLGDPKIT PMDIAMVTRQ IATMLAAGVP LVTTIELLGR GHEKVKMREL 120
  121 LATILSEIQS GIPLSDALRP HRRYFDDLYV DLVAAGEHSG SLDVVFDRIA TYREKSEALK 180
  181 SKIKKAMFYP AAVVIVAILV TALLLLFVVP QFEDIFKGFG AELPAFTQLV LQISRGLQSS 240
  241 WYIFLGAIVA GVFLFVRAHR NSQIVRDRVD EAVLKIPAIG PILHKGAMAR FARTLATTFA 300
  301 AGVPLIDGLE SAAGASGNAV YRKAILKIRQ EVMAGMQMNV AMRTTGLFPD MLIQMVMIGE 360
  361 ESGSLDNMLN KVSTIYEMQV DDAVDGLSSL IEPIMMVVIG TVVGGLIVAM YLPIFQMGKV 420
  421 VGG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..74] deduced N/A No confident structure predictions are available.
    2 View Details [75..222] Pfam 23.136677 No description for PF00482.14 was found. No confident structure predictions are available.
    3 View Details [223..423] Pfam 18.853872 No description for PF00482.14 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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