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Protein Overview: gi|24345855, gi|...

General Information:
Name(s) found: gi|24371997 [NCBI NR]
gi|24345855 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24371997|ref|NP_716039.1| alcohol dehydrogenase, zinc-containing [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24345855|gb|AAN53484.1|AE015488_6 alcohol dehydrogenase, zinc-containing [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 337 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: fermentation [ISSLink to PubMed article]
    Molecular Function: zinc ion binding [ISSLink to PubMed article]
    alcohol dehydrogenase activity, zinc-dependent [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRAVGYQTAG AINALENITL AKPTPTGFDL LVEVKAISVN PVDTKIRASS SAPAGEYKIL  60
   61 GWDAVGVVKA IGDKVSLFKV GDEVWYAGDI SRSGSYAEYQ LVDERIVAHK PQTLSYAQAA 120
  121 ALPLTSITAW ELLFDRLGLP QDGSATDARI LIIGAAGGVG SIITQLAVKL TGAEVIGTAS 180
  181 RPESATWVQT LGADVVINHN QPLSQELAKL DIADVTHVIS LTQTDKHFDE IVKVLRPQGK 240
  241 LALIDDPVGP LDVMKLKRKS LSLHWELMFT RSLYQTEDMI AQHHLLNRIA ELIDTGKVKS 300
  301 TFGEHYGTIN AQNLLKAHAQ IESGKAIGKI VLEGFSQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..337] PSI-BLAST 72.0 CRYSTAL STRUCTURE OF NAD(+)-DEPENDENT ALCOHOL DEHYDROGENASE FROM BACILLUS STEAROTHERMOPHILUS STRAIN LLD-R

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • protein binding
    		•  2.15067835769532 bayes_pls_golite062009
  • binding
    		•  1.82317331968645 bayes_pls_golite062009
  • chaperone binding
    		•  1.14101116877859 bayes_pls_golite062009
  • oxidoreductase activity
    		•  0.984900065905507 bayes_pls_golite062009
  • alcohol dehydrogenase (NAD) activity
    		•  0.861534636764975 bayes_pls_golite062009
  • alcohol dehydrogenase activity, zinc-dependent
    		•  0.558610278939188 bayes_pls_golite062009
  • catalytic activity
    		•  0.217171374336363 bayes_pls_golite062009
  • oxidoreductase activity, acting on CH-OH group of donors
    		•  0.207183346839821 bayes_pls_golite062009
  • oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor
    		•  0.19043692431495 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.71

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle