YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: PRPF_SHEON

General Information:
Name(s) found: PRPF_SHEON [Swiss-Prot]
Description(s) found:
Found 6 descriptions.
SHOW ALL
  • 2-methyl-aconitate isomerase OS=Shewanella oneidensis (strain MR-1) GN=prpF PE=1 SV=1 [Swiss-Prot]
    • Organism: Shewanella oneidensis MR-1
    Length: 397 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: propionate catabolic process, 2-methylcitrate cycle [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNKLFPPQI KVAATYMRGG TSKGVFFRLQ DLPEAAQVPG PARDALLLRV IGSPDPYAKQ  60
   61 IDGMGGATSS TSKTVILSHS SKANHDVDYL FGQVSIDKPF VDWSGNCGNL TAAVGAFAIS 120
  121 NGLIDAARIP RNGVCTVRIW QANIGKTIIA HVPITDGAVQ ETGDFELDGV TFPAAEVQIE 180
  181 FMNPAADDDG EGGCMFPTGN LVDVLEVPGI GRFNATMINA GIPTIFINAE DLGYTGTELQ 240
  241 DDINSDNAAL AKFETIRAHG ALRMGLIKHI DEAASRQHTP KIAFVAPPKS YASSSGKTVA 300
  301 AEDVDLLVRA LSMGKLHHAM MGTAAVAIGT AAAIPGTLVN LAAGGGEKEA VRFGHPSGTL 360
  361 RVGAQAVQEN GEWTVIKAIM SRSARVLMEG FVRVPKP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..397] PSI-BLAST 1000.0 No description for 2pvzA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.44

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle