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Protein Overview: gi|24345706, gi|...

General Information:
Name(s) found: gi|24371883 [NCBI NR]
gi|24345706 [NCBI NR]
Description(s) found:
Found 4 descriptions.
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  • gi|24371883|ref|NP_715925.1| type IV pilus biogenesis protein PilQ [Shewanella oneidensis MR-1] [NCBI NR]
  • gi|24345706|gb|AAN53370.1|AE015476_11 type IV pilus biogenesis protein PilQ [Shewanella oneidensis MR-1] [NCBI NR]
    • Organism: Shewanella oneidensis MR-1
    Length: 684 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: pilus assembly [ISSLink to PubMed article]
    protein secretion by the type II secretion system [ISSLink to PubMed article]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKSSAAIKIP LSFLTSGLVK SVIGIALLFG FLPSSFAENR LIDVKYHALV DHQLAVELVF  60
   61 EDAISAPKID SNASPAELVL TFDNSISGLS KDRLPINQVG VKDIVTSQHD ARLKVTLGLS 120
  121 KVKPYQGSVV GNSYRLTIND GVASSQASNN PFVNSVKNID FRRNSNGGGD LLVYLNNRSV 180
  181 AANVEQIGAK LEVQLYNTDI NNDLLYVMDV QDFSTPVKNF ETFKDDLTAR ILVDVTGNYE 240
  241 FNFKQEDNLF ILSINKVERV VATKDIKKYN GKTLSLNFQN ISVRTVLQII ADYNNFNLVT 300
  301 SDSVEGDITL RLDDVPWDQA LDLILQTKGL DKRIEGNILM VAPSEELAIR ESQNLKNKQE 360
  361 VKELAPLYSE YLQINYAKAT DIAELLKGAD SSLLSPRGSV AVDERTNTVL VKDTAEIIEN 420
  421 IHRLVEVLDI PIRQVLIESR MVTVKDDVSE DLGIRWGVTD QQGNKGTSGS LEGAGDIANG 480
  481 KVPSLDNRLN VNLPAAVTNP TSIAFHVAKL ADGTILDLEL SALEQENKGE IIASPRITTS 540
  541 NQKAAYIEQG VEIPYVQSTS SGATSVTFKK AVLSLRVTPQ ITPDNRVILD LEITQDSQGK 600
  601 TVDTPTGPAV AIDTQRIGTQ VLVDNGETIV LGGIYQQNLI SRVSKVPILG DIPLVGFLFR 660
  661 NTTDKNERQE LLIFVTPKIV NEKL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..239] MSA 5.179991 View MSA. No confident structure predictions are available.
    2 View Details [240..302] deduced N/A No confident structure predictions are available.
    3 View Details [303..473] Pfam 17.013228 No description for PF03958.5 was found. No confident structure predictions are available.
    4 View Details [474..565] deduced N/A No confident structure predictions are available.
    5 View Details [566..684] MSA 5.269987 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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