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Protein Overview: SELU_SHEON

General Information:
Name(s) found: SELU_SHEON [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
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  • tRNA 2-selenouridine synthase OS=Shewanella oneidensis (strain MR-1) GN=selU PE=3 SV=1 [Swiss-Prot]
    • Organism: Shewanella oneidensis MR-1
    Length: 376 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTTTLIPAQQ YRDIFVAGKP LIDLRAPIEF NRGAFPSSVN LPLMVDKERE KVGTCYKQQG  60
   61 QQAAIALGHS LVHGAVKQQR IDAWLGFLAA QPEAYLYCFR GGLRSQLTQQ WLKEAGATVP 120
  121 YVQGGYKGMR QYLIGVIETT PSQQPLLSLS GMTGSGKTDF LIQRKEAVDL EGIANHRGSS 180
  181 FGKNIDPQPT QINFENQLAI ALLRHQQDNH SCLLLEDESF LIGRSALPQS FYNAMQAADI 240
  241 LVLEEADDIR LNRLLDEYVH KMHQGFVERL GIEAGFNAFS QYLLQSLTSI RKRLGGKQYQ 300
  301 ELQDTMQQAL SQQLNQNQTS QHLAWINLLL QKYYDPMYEY QLEKKAHRVL FRGNHQAMHE 360
  361 WLDNLSQDSL SQENLG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..268] PSI-BLAST 8.30103 Crystal Structure of Thiosulfate sulfurtransferase from Pseudomonas aeruginosa
    2 View Details [269..376] MSA 1.085971 View MSA. No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • thiosulfate sulfurtransferase activity
    		•  3.4060283973149 bayes_pls_golite062009
  • sulfurtransferase activity
    		•  2.00214292806095 bayes_pls_golite062009
  • transferase activity, transferring sulfur-containing groups
    		•  1.49017617674976 bayes_pls_golite062009
  • catalytic activity
    		•  1.05774816707958 bayes_pls_golite062009
  • transferase activity
    		•  0.503171603133473 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle