Protein Overview: gi|24345567, gi|...

General Information:
Name(s) found:	gi\|24371774 [NCBI NR] gi\|24345567 [NCBI NR]
Description(s) found: SHOW ONLY BEST	gi\|24371774\|ref\|NP_715816.1\| general secretion pathway protein L [Shewanella oneidensis MR-1] [NCBI NR] gi\|24345567\|gb\|AAN53261.1\|AE015467_6 general secretion pathway protein L [Shewanella oneidensis MR-1] [NCBI NR] general secretion pathway protein L [Shewanella oneidensis MR-1]gi\|24345567\|gb\|AAN53261.1\| general secretion pathway protein L [Shewanella oneidensis MR-1] [nrdb_11152004_Chlamydomonas] general secretion pathway protein L [Shewanella oneidensis MR-1] [nr-271106-contam.fasta]
Organism:	Shewanella oneidensis MR-1
Length:	395 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	protein secretion [ISS]
Molecular Function:	protein transporter activity [ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSERLFIRLG RTAEQACSWL VWSEQEQEII ASGELANAQG LSTLTERAGN RPIDVLVPAS  60
   61 AMTLTSVNLP EKGQRQALKA LPFMLEESIA DDVDAMHFTV GPRNGDALSV VAVAHEQMQT 120
  121 WLSCLADAGL KVKRIVPDCL ALPLQECQWA AMRFGNELLL RTGLGTGHSL PLPWLPVAMK 180
  181 QLTAQAEELS VASYSEMQLD GVELKPQPLD LPMLVLARGI LHAPINLLSG VYTPKREYSK 240
  241 HLLQWKNAAI VLAVAIVLSL VNKGLTIHQV NGQIADLKAQ SEAIYQQVVP GNTRIVNLRS 300
  301 QMESQLRSLQ GQGSGAEFFS MLAGLQDAFK QVPELKPNSL RFESARNEIR MQVTAKNYAQ 360
  361 IEKFKEIVGR RFQMDGGTMN SGEDQVTSTL TLRSK

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Searching the YRC Public Image Repository, found results:

Currently showing to of results.

[View Search in the YRC Public Image Repository]

Searching the YRC Public Image Repository, found no results.

Ginzu Version Information

TMHMM	2.0c	PSIPRED	v2.61
SignalP	3.0	COILS	1999
DISOPRED	v0.1	NCBI nr	06/2007
PSI-BLAST	2.2.18	FFAS	ffas03
PDB	06/2007	Pfam	22
HMMER	2.3.2

Gene Ontology predictions

Term	Confidence	Notes
protein transporter activity	4.02866382720893	bayes_pls_golite062009
protein binding	1.35507414089234	bayes_pls_golite062009
binding	1.02845327471562	bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides	0.900931843471417	bayes_pls_golite062009
hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	0.898645342556399	bayes_pls_golite062009
pyrophosphatase activity	0.875671218597808	bayes_pls_golite062009
nucleoside-triphosphatase activity	0.78242344952806	bayes_pls_golite062009
transporter activity	0.765123574918886	bayes_pls_golite062009
ATPase activity	0.687771333492666	bayes_pls_golite062009
unfolded protein binding	0.280566495830281	bayes_pls_golite062009
substrate-specific transporter activity	0.182906814232639	bayes_pls_golite062009

No functions predicted.

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.64

Source: Reynolds et al. (2008)

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..233]	PSI-BLAST	56.69897	cyto-EpsL: the cytoplasmic domain of EpsL, an inner membrane component of the type II secretion system of Vibrio cholerae
2	View Details	[234..331]	deduced	N/A	No confident structure predictions are available.
3	View Details	[332..395]	MSA	1.087988	View MSA. Confident ab initio structure predictions are available.

Protein Overview: gi|24345567, gi|...

Protein Complex Data

Mass Spectrometry Data

Yeast Two-Hybrid Data

Microscopy / Localization Data

Protein Structure Data

Philius Transmembrane Prediction: