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Protein Overview: PCKA_SHEON

General Information:
Name(s) found: PCKA_SHEON [Swiss-Prot]
Description(s) found:
Found 6 descriptions.
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  • Phosphoenolpyruvate carboxykinase [ATP] OS=Shewanella oneidensis (strain MR-1) GN=pckA PE=3 SV=1 [Swiss-Prot]
    • Organism: Shewanella oneidensis MR-1
    Length: 513 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: gluconeogenesis [ISSLink to PubMed article]
    Molecular Function: phosphoenolpyruvate carboxykinase (ATP) activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MADGLNRVHY NPSTAQLVEF ALLRGEGELT ANGALVAKTG TRTGRSPGDR FIVKEPGSAA  60
   61 DIEWGPVNQA FEPGAFEGLW ARVEAFLADK ELFVSDLEVG ADPEHYQPVR VTTQYAWHQL 120
  121 FARNLFIIPE EFNRQNKPVW QIINAPDFVC MPERDGTNSD AAVILNFAER KVLLAGLKYA 180
  181 GEMKKSMFSV QNFLLPAQGV LPMHCSANVG KDGDTTLFFG LSGTGKTTLS ADPKRFLIGD 240
  241 DEHGWAPGGV FNIEGGCYAK CIDLSQKNEP VIWDAIRFGT VLENVVMDEH RVPNYKDSSL 300
  301 TENTRAAYPL EHIAQRKEDN RGAEPHAVVF LTCDVSGVLP PVSILSKEQA AYHFLSGYTA 360
  361 KVGSTEIGST SAIQSTFSTC FGAPFFPRPA GVYAELLMKR IESFGSQVYL VNTGWTGGPH 420
  421 GIGKRFDIPT TRAIIDAIVS GELKNVETVH LDTLNLAVPV AVSGVDSNLL NPVNTWSDKA 480
  481 LYAEYAQKLA AAFTKNFAKY QVSDAIRNAG PKA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..513] PSI-BLAST 1000.0 Phosphoenolpyruvate (PEP) carboxykinase (ATP-oxaloacetate carboxy-liase)

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • phosphoenolpyruvate carboxykinase activity
    		•  5.427657115096 bayes_pls_golite062009
  • phosphoenolpyruvate carboxykinase (ATP) activity
    		•  4.07297753409796 bayes_pls_golite062009
  • phosphoenolpyruvate carboxykinase (GTP) activity
    		•  3.22045404005498 bayes_pls_golite062009
  • catalytic activity
    		•  1.59551963655826 bayes_pls_golite062009
  • lyase activity
    		•  0.903636804009288 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  0.63361553348301 bayes_pls_golite062009
  • carboxy-lyase activity
    		•  0.110170641189915 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle