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Protein Overview: FDHD_SHEON

General Information:
Name(s) found: FDHD_SHEON [Swiss-Prot]
Description(s) found:
Found 5 descriptions.
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  • Sulfurtransferase FdhD OS=Shewanella oneidensis (strain MR-1) GN=fdhD PE=3 SV=1 [Swiss-Prot]
    • Organism: Shewanella oneidensis MR-1
    Length: 278 amino acids

    Gene Ontology:
    Cellular Component: formate dehydrogenase complex [ISSLink to PubMed article]
    Biological Process: anaerobic respiration [ISSLink to PubMed article]
    Molecular Function: formate dehydrogenase activity [ISSLink to PubMed article]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEYHSHTVVT ERKVTLLEQG QASDLTDYVA NEVRVALVYN GISHTVMLAS PENLEEFAIG  60
   61 FTLSERIVSH VNEIKGVDLE FTPEGVLIQV EITQRCFMAL KQLRRNMAGR TGCGLCGVAQ 120
  121 LEEAVKPVIR VDSDARFNID HLQFALEQVK DNQHHFKLTG ATHAAMGLDL EGQIIAAYED 180
  181 IGRHIALDKL IGGCSMRHAK RPVAVLLTSR ASFEMVQKAA SANIQILFAM SAVTSLALEL 240
  241 AEKSNITLIG FCRNGRATLY THGYRLLGLN RASLAKAI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..278] PSI-BLAST 52.154902 No description for 2pw9A was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • formate dehydrogenase activity
    		•  11.6538357294979 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
    		•  6.39976727113281 bayes_pls_golite062009
  • oxidoreductase activity, acting on the aldehyde or oxo group of donors
    		•  5.99996975993203 bayes_pls_golite062009
  • oxidoreductase activity
    		•  3.97029744496041 bayes_pls_golite062009
  • methyltransferase activity
    		•  1.82461172360024 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  1.74440766585265 bayes_pls_golite062009
  • catalytic activity
    		•  1.70756445127105 bayes_pls_golite062009
  • hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines
    		•  1.25933001876793 bayes_pls_golite062009
  • glycine hydroxymethyltransferase activity
    		•  1.14540769627856 bayes_pls_golite062009
  • electron carrier activity
    		•  0.851003321957332 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.88

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle