Protein Overview: gi|24371703, gi|...

General Information:
Name(s) found:	gi\|24371703 [NCBI NR] gi\|24345479 [NCBI NR]
Description(s) found: Found 4 descriptions. SHOW ALL	gi\|24371703\|ref\|NP_715745.1\| formate dehydrogenase, nitrate-inducible, cytochrome b556 subunit [Shewanella oneidensis MR-1] [NCBI NR] gi\|24345479\|gb\|AAN53190.1\|AE015461_8 formate dehydrogenase, nitrate-inducible, cytochrome b556 subunit [Shewanella oneidensis MR-1] [NCBI NR]
Organism:	Shewanella oneidensis MR-1
Length:	213 amino acids
Gene Ontology:
Cellular Component:	formate dehydrogenase complex [ISS]
Biological Process:	anaerobic respiration [ISS]
Molecular Function:	electron carrier activity [ISS] formate dehydrogenase activity [ISS]

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKHNKQEMV VRHKLFDRIC HWFIVAVGLV TFLTGFSFFY PSFQWLGAIA GTPQLAKFIH  60
   61 PIAGLLMCLP LMLMLVRYYH HNKWEKHDLA WMLAIKDVMF ENEEKIPPIG HYNPGQKVLF 120
  121 RAFVLTSITL TVTGFIMWQP YFAPYFSATV VGWAIVLHAI SALIMLMFVM VHFWMASWVE 180
  181 GSITGMLYGK VSKAWCRKHH PLMLDEHSDV EKH

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..213]	PSI-BLAST	47.69897	Formate dehydrogenase N, cytochrome (gamma) subunit

Functions predicted (by domain):

#

Gene Ontology predictions

1

Term	Confidence	Notes
formate dehydrogenase activity	12.0031413212101	bayes_pls_golite062009
oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor	6.74953039117709	bayes_pls_golite062009
oxidoreductase activity	6.50321219171766	bayes_pls_golite062009
oxidoreductase activity, acting on the aldehyde or oxo group of donors	6.34988495153085	bayes_pls_golite062009
ubiquinol-cytochrome-c reductase activity	4.50524595323325	bayes_pls_golite062009
oxidoreductase activity, acting on diphenols and related substances as donors, cytochrome as acceptor	4.50524595323325	bayes_pls_golite062009
hydrogen ion transmembrane transporter activity	4.29455986972274	bayes_pls_golite062009
monovalent inorganic cation transmembrane transporter activity	4.14658254808421	bayes_pls_golite062009
oxidoreductase activity, acting on diphenols and related substances as donors	4.11558350750273	bayes_pls_golite062009
inorganic cation transmembrane transporter activity	3.50341532760587	bayes_pls_golite062009
electron carrier activity	3.28715047874253	bayes_pls_golite062009
cation transmembrane transporter activity	3.24971217721974	bayes_pls_golite062009
ion transmembrane transporter activity	3.0416933490072	bayes_pls_golite062009
catalytic activity	1.19342057724506	bayes_pls_golite062009
binding	1.00930558921984	bayes_pls_golite062009
protein binding	0.588939203772891	bayes_pls_golite062009
substrate-specific transmembrane transporter activity	0.173080554590997	bayes_pls_golite062009
substrate-specific transporter activity	0.0890676728517352	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

[View Details]

Source: Reynolds et al. 2008. Manuscript submitted

Philius confidence legend

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