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Protein Overview: YBD6_YEAST

General Information:
Name(s) found: YBD6_YEAST [Swiss-Prot]
Description(s) found:
  • UPF0001 protein YBL036C OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=YBL036C PE=1 SV=1 [Swiss-Prot]
    • Organism: Saccharomyces cerevisiae S288c
    Length: 257 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTGITYDED RKTQLIAQYE SVREVVNAEA KNVHVNENAS KILLLVVSKL KPASDIQILY  60
   61 DHGVREFGEN YVQELIEKAK LLPDDIKWHF IGGLQTNKCK DLAKVPNLYS VETIDSLKKA 120
  121 KKLNESRAKF QPDCNPILCN VQINTSHEDQ KSGLNNEAEI FEVIDFFLSE ECKYIKLNGL 180
  181 MTIGSWNVSH EDSKENRDFA TLVEWKKKID AKFGTSLKLS MGMSADFREA IRQGTAEVRI 240
  241 GTDIFGARPP KNEARII

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..257] PSI-BLAST 1540.69897 "Hypothetical" protein ybl036c

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • alanine racemase activity
    		•  2.62362449847897 bayes_pls_golite062009
  • amino-acid racemase activity
    		•  2.31165775898309 bayes_pls_golite062009
  • racemase and epimerase activity, acting on amino acids and derivatives
    		•  2.17003836264776 bayes_pls_golite062009
  • catalytic activity
    		•  1.23611818854966 bayes_pls_golite062009
  • diaminopimelate decarboxylase activity
    		•  0.492894938678183 bayes_pls_golite062009
  • binding
    		•  0.349413451832348 bayes_pls_golite062009
  • racemase and epimerase activity
    		•  0.328743179708914 bayes_pls_golite062009
  • lyase activity
    		•  0.320782640542698 bayes_pls_golite062009
  • protein binding
    		•  0.20402482036521 bayes_pls_golite062009
  • carboxy-lyase activity
    		•  0.14065879331273 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle