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Protein Overview: STB4_YEAST

General Information:
Name(s) found: STB4_YEAST [Swiss-Prot]
Description(s) found:
  • Probable transcriptional regulatory protein STB4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=STB4 PE=1 SV=1 [Swiss-Prot]
    • Organism: Saccharomyces cerevisiae S288c
    Length: 949 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSINHEIYYI LVFEHRSVAI KLIIVVIVLL QFFLARSRQI DRTWAHTNRK ERFREMTAIG  60
   61 NTDDALDTST AASKENGKGR LRVQKACELC KKRKVKCDGN NPCLNCSKHQ KECRYDFKAT 120
  121 NRKRRRRQVA SAVRDVSKTY AETSESFPRD LLSKSNIIIN APSDGVSSSA SNSPNPNSHY 180
  181 HHISSTLPFM SGRPNHTFHS GSNLNGENNN NSFPEDHMAK LLLQLSSKLG NTTKESSIRT 240
  241 TRTNASDVNA NPTVVNMKNS QEDCDTNHRS AICDSAEALH NNNINSKENK IINSQITNTV 300
  301 NDHFESPWQT FSLDKYRFHR RYQNILPYYL GVSILKDLSP QTIEYAKLKR PRVQNYGWNL 360
  361 SGGHYLKYKG DFRSQEKNIR HESKFFDFDD PVHLSLINKL LRYYFDEINP VFSIIHEATF 420
  421 WQQYNNKFLR QGKQNNSSAN LFTSMLYLIL STTLRFREGH LDGQKGQGTY SNTSLNITFE 480
  481 EKSILIKKPS IEENLFKYAY LIINTLTFEW ESFELIQSWL LITFYFRTCY RQTACWNALS 540
  541 QAVNMCNGMS LYLNKFPEIH STYDESKAWH CFWCCFIMDK LISFQMGRFY QLSLPASEMC 600
  601 EQMNLVKSKK FLQEEDDWFH EETFQMLDLS IIVTQFLKRD AQDLNLNETV QLRSQLGQWY 660
  661 DTFIVGSQTN AYDDNYRYFY QVQPFMTYLD IRLTFEVRQL FCLIAPSSTA NNKSLEYVVD 720
  721 TELLISHCQM AIENLAEITR SNLFFVPWWL NLSQLFTVNL ICIIYLHAGI AVTQNKAIMQ 780
  781 SCQEIWRTLE CSKPKNRPSM LPECLWCLKM LNHMFCIRLR DSALQLEATL GTDHGDDTPN 840
  841 RNKFEQFKKV GDNDADVEVD AGEREENADE RQENPHNNSK RVPLATRSHN TTNFDGSIAI 900
  901 SPESAVANLG TDTGLPSDVL DTVSKIGNSP NVFDDDLFSN LLWFDQNFA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..67] deduced N/A No confident structure predictions are available.
    2 View Details [68..222] PSI-BLAST 13.522879 PPR1
    3 View Details [223..949] deduced N/A No confident structure predictions are available.
    4 View Details [245..369] FFAS03 2.25 PPR1
    5 View Details [370..460] deduced N/A No confident structure predictions are available.
    6 View Details [461..669] deduced N/A No confident structure predictions are available.
    7 View Details [670..837] deduced N/A No confident structure predictions are available.
    8 View Details [838..949] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • nucleic acid binding
    		•  1.82012686871762 bayes_pls_golite062009
  • DNA binding
    		•  1.78629392205727 bayes_pls_golite062009
  • binding
    		•  1.76935935681721 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.70162817919532 bayes_pls_golite062009
  • transcription factor activity
    		•  0.606922041618269 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  0.160255273911114 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  0.0882387940255902 bayes_pls_golite062009
    3 No functions predicted.
    4
    Term Confidence Notes
  • binding
    		•  1.67816066599632 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.62620944167363 bayes_pls_golite062009
  • DNA binding
    		•  1.56468711383438 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.48580372603095 bayes_pls_golite062009
  • transcription factor activity
    		•  0.430971106781157 bayes_pls_golite062009
    5 No functions predicted.
    6 No functions predicted.
    7 No functions predicted.
    8 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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    Created and Maintained by: Michael Riffle