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Protein Overview: SIP4_YEAST

General Information:
Name(s) found: SIP4_YEAST [Swiss-Prot]
Description(s) found:
Found 2 descriptions.
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  • Protein SIP4 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SIP4 PE=3 SV=1 [Swiss-Prot]
    • Organism: Saccharomyces cerevisiae S288c
    Length: 829 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAKRKYGRSY SLDDTDSCSN KVLIVPTGQS SSNAITDFSV RKAHACDRCR LKKIKCDGLK  60
   61 PNCSNCAKID FPCKTSDKLS RRGLPKGYTE LLEKEVVRLT NMNASSSANA NSNLPFINDT 120
  121 FYCFDNYNTQ SENQRFLGHL TWNILTNTFP TQKAVVFTDD RNNIDLQLQL LTNFLNLNGD 180
  181 FNHLPNFLLL KYDYNLQFLK NLLSVIIKDF FKRQNSLLLL LYPTNLWKNL LLDKINSTAM 240
  241 TGEPITLLAL LYIIQFTWSC FDDFKLFKVT KLIVSLTTNS KLDLKVLQLV NLSIFYFMGA 300
  301 SVDSCKSKSS LTEHSNVNSV IWTNDLLNLN FTNILNMGLY INPKNLIPIS GNNNNNKSNE 360
  361 EDDRIVTFWC FQFLSSWWSL IQGLPKSNFL TEEFQPKSIS VLEIPRLKPF EILLNFIIYS 420
  421 LDGCNLLNIS SLNVSDPNFQ FFQNELESFK KNLLLWNLYH NLSDHDNFRF LTSSSNKKLT 480
  481 TNLLLKNLTG LNHKLNQPDF VEIQLTLFYL SLKLMTLKEG DQDLKKEDIS LEILSLYFLI 540
  541 LTDDSNNDDN QQLQPQQLNL YHFTPFNSID IIDLCLNNLN NWSLSLKYES GQNQPHSSKI 600
  601 KFEKFQNFLN HWCPIWYYDE FSTNPFLQIL KINFKLLPFE TIHYSQEEQR LLISLNKLRY 660
  661 LDAVSSFNSS SVKSNFASKV NTQLNLLQHS SSNSNFLDAS PYDFNKIFMN NFENYDYETD 720
  721 EGYAEDDDEE DSDSDNSLPL EIPFKKSKNK CKNRNKELSQ RLSLFENRDS NSVDFNTDTN 780
  781 LNLNPDSPSV TSSKKKYLDH IILDNRDIVS NHDSSKQKFK IQNILNSTF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..176] PSI-BLAST 105.30103 PPR1
    2 View Details [177..829] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  4.56444258780502 bayes_pls_golite062009
  • DNA binding
    		•  4.26146437716972 bayes_pls_golite062009
  • nucleic acid binding
    		•  4.17369933547911 bayes_pls_golite062009
  • transcription factor activity
    		•  3.049435548132 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  2.93914501897006 bayes_pls_golite062009
  • binding
    		•  2.91929847152301 bayes_pls_golite062009
  • specific RNA polymerase II transcription factor activity
    		•  2.44382866473054 bayes_pls_golite062009
  • transcription activator activity
    		•  1.89281746291341 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  1.87955444697212 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle