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Protein Overview: SCC2_YEAST

General Information:
Name(s) found: SCC2_YEAST [Swiss-Prot]
Description(s) found:
  • Sister chromatid cohesion protein 2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=SCC2 PE=1 SV=1 [Swiss-Prot]
    • Organism: Saccharomyces cerevisiae S288c
    Length: 1493 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYPGKDKNI PGRIIEALED LPLSYLVPKD GLAALVNAPM RVSLPFDKTI FTSADDGRDV  60
   61 NINVLGTANS TTSSIKNEAE KERLVFKRPS NFTSSANSVD YVPTNFLEGL SPLAQSVLST 120
  121 HKGLNDSINI EKKSEIVSRP EAKHKLESVT SNAGNLSFND NSSNKKTKTS TGVTMTQANL 180
  181 AEQYLNDLKN ILDIVGFDQN SAEIGNIEYW LQLPNKKFVL TTNCLTKLQM TIKNITDNPQ 240
  241 LSNSIEITWL LRLLDVMVCN IKFSKSSLKM GLDDSMLRYI ALLSTIVLFN IFLLGKNDSN 300
  301 LHRESYIMEP VNFLSDLIES LKILTIEYGS LKIEFDTFQE ALELLPKYIR NGPFLDDNVT 360
  361 AKLVYIFSDL LMNNDIEATT NIQFQSFWDN VKRISSDILV SLFGSFDQQR GFIIEELLSH 420
  421 IEKLPTKRIQ KKLRKVGNQN IYITDFTFTL MSMLENINCY SFCNQMKDIA PENIDLLKNE 480
  481 YKKQEEFLFN IVEHINDTIL ERFFKNPSAL RYVIDNFVQD LLLLISSPQW PVTEKILSSL 540
  541 LKRLLSVYSP SMQVSANIET ICLQLIGNIG STIFDIKCST RDHEDNNLIK MINYPETLPH 600
  601 FFKSFEECIA YNETIKCRRS ATRFLWNLRL GTILILEEYT KDAKEQIITV DNELKKILEQ 660
  661 IKDGGLGPEL ENREADFSTI KLDYFSILHA FELLNLYDPY LKLILSLLAK DKIKLRSTAI 720
  721 KCLSMLASKD KVILSNPMVK ETIHRRLNDS SASVKDAILD LVSINSSYFE FYQQINNNYN 780
  781 DDSIMVRKHV LRINEKMYDE TNDIVTKVYV IARILMKIED EEDNIIDMAR LILLNRWILK 840
  841 VHEVLDQPEK LKEISSSVLL VMSRVAIMNE KCSQLFDLFL NFYLLNKEAH SKEAYDKITH 900
  901 VLTILTDFLV QKIVELNSDD TNEKNSIVDK QNFLNLLAKF ADSTVSFLTK DHITALYPYM 960
  961 VSDEKSDFHY YILQVFRCTF EKLANFKQKF LYDLETTLLS RLPKMNVREI DEAMPLIWSV1020
 1021 ATHRHDTARV AKACSSCLSH LHPYINKANN EEAAIVVDGK LQRLIYLSTG FARFCFPKPS1080
 1081 NDKIAFLQEG ETLYEHITKC LLVLSKDKIT HVIRRVAVKN LTKLCGNHPK LFNSRHVLHL1140
 1141 LDKEFQSDQL DIKLVILESL YDLFLLEERK SVRNTGVNST LSSNSILKKK LLKTNRVEFA1200
 1201 NDGVCSALAT RFLDNILQLC LLRDLKNSLV AIRLLKLILK FGYTNPSHSI PTVIALFAST1260
 1261 SQYIRHVAYE LLEDLFEKYE TLVFSSLSRG VTKAIHYSIH TDEKYYYKHD HFLSLLEKLC1320
 1321 GTGKKNGPKF FKVLKRIMQS YLDDITDLTS TNSSVQKSIF VLCTNISNIT FVSQYDLVSL1380
 1381 LKTIDLTTDR LKEVIMDEIG DNVSSLSVSE EKLSGIILIQ LSLQDLGTYL LHLYGLRDDV1440
 1441 LLLDIVEESE LKNKQLPAKK PDISKFSAQL ENIEQYSSNG KLLTYFRKHV KDT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..354] deduced N/A No confident structure predictions are available.
    2 View Details [355..1408] MSA 1.007903 View MSA. No confident structure predictions are available.
    3 View Details [1409..1493] deduced N/A No confident structure predictions are available.
    4 View Details [381..480] MSA 1.033993 View MSA. No confident structure predictions are available.
    5 View Details [481..1309] FFAS03 3.13 No description for 2ie3A was found.
    6 View Details [1310..1493] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2 No functions predicted.
    3 No functions predicted.
    4 No functions predicted.
    5
    Term Confidence Notes
  • binding
    		•  2.81296846555705 bayes_pls_golite062009
  • protein transporter activity
    		•  2.6734690782599 bayes_pls_golite062009
  • protein binding
    		•  1.81870125631028 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.78701774446386 bayes_pls_golite062009
  • transporter activity
    		•  1.44589191111517 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  1.19535295481088 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.08645493064764 bayes_pls_golite062009
  • DNA binding
    		•  0.956143892328242 bayes_pls_golite062009
  • protein transmembrane transporter activity
    		•  0.824035252349223 bayes_pls_golite062009
  • structure-specific DNA binding
    		•  0.384349606267362 bayes_pls_golite062009
  • transcription factor activity
    		•  0.371244009721798 bayes_pls_golite062009
  • RNA binding
    		•  0.369141052569571 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  0.338017015160581 bayes_pls_golite062009
  • signal sequence binding
    		•  0.262155773896291 bayes_pls_golite062009
  • nuclear localization sequence binding
    		•  0.19122877456451 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  0.0946244209704199 bayes_pls_golite062009
    6 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.50

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle