YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: PUT3_YEAST

General Information:
Name(s) found: PUT3_YEAST [Swiss-Prot]
Description(s) found:
  • Proline utilization trans-activator OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PUT3 PE=1 SV=1 [Swiss-Prot]
    • Organism: Saccharomyces cerevisiae S288c
    Length: 979 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVTDQGSRHS IQSKQPAYVN KQPQKRQQRS SVACLSCRKR HIKCPGGNPC QKCVTSNAIC  60
   61 EYLEPSKKIV VSTKYLQQLQ KDLNDKTEEN NRLKALLLER PVSVRGKDNS DDDERHINNA 120
  121 PSSDTLEVSS APAAPIFDLM SNSNTASDND NDDDNSNRIT NNRSYDHSLE KYYKKAISIF 180
  181 KQPANANGEN GNGANGHEDD DEDDEEISTN FAQRSGRLIE SHNGFHYFVG SSSMTLFGLE 240
  241 IQSLVTKYIS VKNFRPLPIN TKNKILNSNL NPAISSFINS NNYLFSSYNF LNPISTIVNL 300
  301 NSINDNLSPL MFKIILKSDT DGSSGQEEVI QFQLPSYNYT KLLIDCFINY NDGCFYFFNE 360
  361 GLVKCGINKL YLENKWLYYD NTKKALDNEN DPILQAVWFC KILLILAVGE MYLGSINNEM 420
  421 LKNYSNQPKL PGSKFFQMGS KIFNCLFSSE RLENVTKKGG IEVLLLYAFF LQVADYTLAS 480
  481 YFYFGQALRT CLILGLHVDS QSDTLSRYEI EHHRRLWWTV YMFERMLSSK AGLPLSFTDY 540
  541 TISTALPADI DDETIEEKNS HYVFRKAELI SNCVTIVKIN AQILSKLYQR QPETNIIITL 600
  601 KVVIKQLLEW RNNLSDSLQV DFTQKDEDFK ISRLSTNMFT EYFQGINLAV RPLLFHFASI 660
  661 QLKRFKTSNT FVNLQNYSAT ISSLLTCSLH ASVNTIRSLW SLLQNSMLAM FSYMDREYLF 720
  721 TSSCTLLLFN TAFGIHEQTL YHLDHSLEIF TQMRNLGNIP AGLRRAQLLT LMANLDFHGI 780
  781 MNDLITKYND ILKFDSMNCE NDNIVEDSNE PKRETEKCKP HKDGDRIDPS IIDCDKSNTN 840
  841 TNMIKNESIS NIVSILPEGA KPTLTDYSNG NNDVNDINVN NSEPSTFFDI ITASLENSYQ 900
  901 TTLTEKGSQV MEKNMDQLDS VHNLNDDDLQ QLLEDLGNID HSDEKLWKEI TDQAMWLGNT 960
  961 MDPTAAAGSE IDFTDYLGP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..132] PSI-BLAST 366.927757 PUT3
    2 View Details [133..813] MSA 8.111977 View MSA. No confident structure predictions are available.
    3 View Details [814..979] deduced N/A No confident structure predictions are available.
    4 View Details [454..564] Pfam 26.69897 No description for PF04082.9 was found. No confident structure predictions are available.
    5 View Details [565..778] MSA 2.250993 View MSA. No confident structure predictions are available.
    6 View Details [779..979] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • transcription regulator activity
    		•  4.56444258780502 bayes_pls_golite062009
  • DNA binding
    		•  4.26146437716972 bayes_pls_golite062009
  • nucleic acid binding
    		•  4.17369933547911 bayes_pls_golite062009
  • transcription factor activity
    		•  3.049435548132 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  2.98081393153291 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  2.93914501897006 bayes_pls_golite062009
  • binding
    		•  2.91929847152301 bayes_pls_golite062009
  • specific RNA polymerase II transcription factor activity
    		•  2.44382866473054 bayes_pls_golite062009
  • transcription activator activity
    		•  2.24483536326713 bayes_pls_golite062009
    2
    Term Confidence Notes
  • transcription regulator activity
    		•  4.34861813464065 bayes_pls_golite062009
  • DNA binding
    		•  4.03985756894684 bayes_pls_golite062009
  • nucleic acid binding
    		•  3.97978190843512 bayes_pls_golite062009
  • transcription factor activity
    		•  2.87348461329489 bayes_pls_golite062009
  • binding
    		•  2.82809978070212 bayes_pls_golite062009
  • sequence-specific DNA binding
    		•  2.77469997789536 bayes_pls_golite062009
  • RNA polymerase II transcription factor activity
    		•  2.70904317608141 bayes_pls_golite062009
  • transcription activator activity
    		•  2.1512787242583 bayes_pls_golite062009
  • specific RNA polymerase II transcription factor activity
    		•  2.08956709478484 bayes_pls_golite062009
    3 No functions predicted.
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.76

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle