Protein Overview: PET54_YEAST

General Information:
Name(s) found:	PET54_YEAST [Swiss-Prot]
Description(s) found:	Protein PET54 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=PET54 PE=1 SV=1 [Swiss-Prot]
Organism:	Saccharomyces cerevisiae S288c
Length:	293 amino acids
Gene Ontology:
Cellular Component:	NONE FOUND
Biological Process:	NONE FOUND
Molecular Function:	NONE FOUND

Sequence:

Sequence:
[PDR BLAST]
[ProtParam]

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKASSKAIKL VLDHLKSTGR VLGSVESGNS ATISEKTASV NKQQQLQEKK PSVLQYRSYN  60
   61 PYLVKEDFLS ILPENLYKKR GQFTNELDFQ LMKVRDPKYF QFKDQYYLFF NDYNSLTEYI 120
  121 KLTKHSRINK IRVKMTPLAQ PLPTLLTKLQ RYSKNLYNAF RSSEQYFEGL NEKVDVSGEF 180
  181 TTNQLRSILD SVEEIENKSV LVWNIPTKLR SHDILNYFWF YNIRSSFKIY WDDEMKRNLR 240
  241 FISFENSHDA YRFKRNYHGL LAKELLTLSE KGDAADYSLE MDDSKILIEH LSE

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data

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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#		Region(s)	Method	Confidence	Match Description
1	View Details	[1..293]	deduced	N/A	No confident structure predictions are available.
2	View Details	[136..293]	FFAS03	1.19	Solution Structure of the RNA recognition motif in RNA-binding region containing protein 1

Functions predicted (by domain):

#

Gene Ontology predictions

1

No functions predicted.

2

Term	Confidence	Notes
nucleic acid binding	3.6649737847299	bayes_pls_golite062009
RNA binding	3.54132281875185	bayes_pls_golite062009
mRNA binding	3.12096544084441	bayes_pls_golite062009
binding	3.05100551329453	bayes_pls_golite062009
	2.65416081536729	bayes_pls_golite062009
transcription regulator activity	1.20182415212933	bayes_pls_golite062009
DNA binding	1.06738888024145	bayes_pls_golite062009
protein binding	1.05805521997665	bayes_pls_golite062009
structural molecule activity	0.767649718525223	bayes_pls_golite062009
poly-pyrimidine tract binding	0.761573507268535	bayes_pls_golite062009
single-stranded RNA binding	0.470675891495223	bayes_pls_golite062009
transcription factor activity	0.273768131383019	bayes_pls_golite062009
translation regulator activity	0.246220338604608	bayes_pls_golite062009
mRNA 3'-UTR binding	0.23733335659183	bayes_pls_golite062009
transcription factor binding	0.0848709019823142	bayes_pls_golite062009
translation factor activity, nucleic acid binding	0.0127733116412899	bayes_pls_golite062009
snRNA binding	0.00892689194659768	bayes_pls_golite062009

Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16

Philius Transmembrane Prediction:

Protein predicted to be:	GLOBULAR (No transmembrane regions or signal peptide)
Confidence of classification:	0.98

Source: Reynolds et al. (2008)

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle