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Protein Overview: IRC3_YEAST

General Information:
Name(s) found: IRC3_YEAST [Swiss-Prot]
Description(s) found:
  • Putative ATP-dependent helicase IRC3 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=IRC3 PE=1 SV=1 [Swiss-Prot]
    • Organism: Saccharomyces cerevisiae S288c
    Length: 689 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTSTLATRLS TYSISLILQR IKIIKRCYSA PVLRDYQQDA IDACVNSIRQ GTKRIGVSLA  60
   61 TGGGKTVIFS NLINQLRQNY FKERQGNFKS LILVHRRELA LQATATLKKI FPDLKVHIEM 120
  121 GKYDCDIEDS DVIVASVQTL IRRLHKYDTN SVNLIIIDEA HHSVANSYRS ILDHFKASTA 180
  181 ETKIPVIGFS ATFERADKRA LSMVMDKIVY HRGILEMIDD KWLCEAKFTS VKIEADLSDV 240
  241 KSTADDFQLA PLSSLMNTKE INEVILKTYL HKKQEKSLKS TLLFGVDKAH VQSLHKLFKD 300
  301 NGINTDYVTS DTKQIERDNI IQKFKNGETE VLMNCGIFTE GTDMPNIDCI LLCRPTKSRS 360
  361 LLIQMIGRGL RLHHSKDHCH IIDFIGASSV GVVSAPTLLG IRSDDIEFDD ATVEDLKAIQ 420
  421 GEIIAKQQKI DERLRALFQT DEAAMENVTE RNSVADWIHS ANSVDLTLCS FDSFRNFTQS 480
  481 NNSYPSGKEF DEASEAVKEM ELLMNSQYPW VKFASNAWGL PLKGKNHLRI YKEKSEDKLS 540
  541 MVYHLKMYRQ LPCFITNKYA DYVPKSIIKD ANLWNVMSKV EKIINTLNSD LEGQTMQYQA 600
  601 ISSKYSKWRQ TVPTSKQRDF VFRKLKKVYG ESSKDFIRLS LDDVTTYVNT KMTKGDASNL 660
  661 IFASSLAPVY PLKSLLRILE YQKRRSFIK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..410] PSI-BLAST 132.228787 Initiation factor 4a
    2 View Details [411..523] PSI-BLAST 72.228787 Nucleotide excision repair enzyme UvrB
    3 View Details [524..689] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.837538244475264 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  0.420384345567397 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  0.411077559082206 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  0.399864241228259 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  0.398496265411009 bayes_pls_golite062009
  • catalytic activity
    		•  0.234613562021476 bayes_pls_golite062009
  • hydrolase activity
    		•  0.216831145240405 bayes_pls_golite062009
    2
    Term Confidence Notes
  • binding
    		•  0.837538244475264 bayes_pls_golite062009
  • nucleoside-triphosphatase activity
    		•  0.420384345567397 bayes_pls_golite062009
  • pyrophosphatase activity
    		•  0.411077559082206 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides
    		•  0.399864241228259 bayes_pls_golite062009
  • hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
    		•  0.398496265411009 bayes_pls_golite062009
  • catalytic activity
    		•  0.234613562021476 bayes_pls_golite062009
  • hydrolase activity
    		•  0.216831145240405 bayes_pls_golite062009
    3 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.92

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle