YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: HMS1_YEAST

General Information:
Name(s) found: HMS1_YEAST [Swiss-Prot]
Description(s) found:
  • Probable transcription factor HMS1 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=HMS1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Saccharomyces cerevisiae S288c
    Length: 434 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPNFQKPFSG SSDGNSVMND LGNKVAIKVF DCRSAQDGSE EQNVNVTTNQ MYLMFQSNNY  60
   61 NVPPPNYNTE DLGSQGPPTH AYYAPFQHPI HLQPPVPPVY KNNTYSATDQ YSDSSFPNTS 120
  121 GHTPVIDSNY YNDALASIPT TTTGSTTMTT DNGNTIDSEE YIDNMEVFSS EENENIDNVK 180
  181 QTDLKSEKDS SLLSAASIVK KEQLSGFENF LPLSKTESPL VTADEIKSSL NLENIDNADS 240
  241 MSFKLKTSPI RKHFHVKPKR ITRVRTGRVS HNIIEKKYRS NINDKIEQLR RTVPTLRVAY 300
  301 KKCNDLPITS RDLADLDGLE PATKLNKASI LTKSIEYICH LERKCLQLSL ANQHLSNDTR 360
  361 DSFVHLTEPS QPLSDNSSSE QVQKQTRSCQ RQRQRQPRQQ QPLHNIQYNI PHQNGLMSGT 420
  421 NNSHDMDFNN AGDF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..263] MSA 9.265997 View MSA. No confident structure predictions are available.
    2 View Details [264..434] PSI-BLAST 45.69897 SREBP-1a

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  2.71844613492852 bayes_pls_golite062009
  • DNA binding
    		•  1.86563747084791 bayes_pls_golite062009
  • transcription regulator activity
    		•  1.821185547269 bayes_pls_golite062009
  • nucleic acid binding
    		•  1.7383733164042 bayes_pls_golite062009
  • transcription factor activity
    		•  1.60036420700371 bayes_pls_golite062009
  • protein binding
    		•  1.2438981435533 bayes_pls_golite062009
  • transcription factor binding
    		•  0.181447848144379 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle