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Protein Overview: EIF3B_YEAST

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

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[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..160] PSI-BLAST 16.69897 Crystal Structure of UP1 Complexed With d(TAGG(6MI)TTAGGG): A Human Telomeric Repeat Containing 6-methyl-8-(2-deoxy-beta-ribofuranosyl)isoxanthopteridine (6MI)
2 View Details [161..679] PSI-BLAST 37.522879 Actin interacting protein 1
3 View Details [680..763] deduced N/A No confident structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1
Term Confidence Notes
  • RNA binding
  • 4.50438526063124 bayes_pls_golite062009
  • translation initiation factor activity
  • 3.27900316559423 bayes_pls_golite062009
  • nucleic acid binding
  • 3.03004688154589 bayes_pls_golite062009
  • mRNA binding
  • 2.92795844574986 bayes_pls_golite062009
  • binding
  • 2.80563734517858 bayes_pls_golite062009
  • structural molecule activity
  • 2.78501986457503 bayes_pls_golite062009
  • 1.49431666307335 bayes_pls_golite062009
  • protein binding
  • 1.02232785292059 bayes_pls_golite062009
  • single-stranded RNA binding
  • 0.90573796517364 bayes_pls_golite062009
  • RNA cap binding
  • 0.847034036194541 bayes_pls_golite062009
  • translation regulator activity
  • 0.38120065819101 bayes_pls_golite062009
  • poly-pyrimidine tract binding
  • 0.32812362201346 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
  • 0.128616879457381 bayes_pls_golite062009
    2
    Term Confidence Notes
  • structural molecule activity
  • 2.6914565031145 bayes_pls_golite062009
  • translation initiation factor activity
  • 2.29806492548141 bayes_pls_golite062009
  • binding
  • 1.58733371663063 bayes_pls_golite062009
  • RNA binding
  • 1.54614730254863 bayes_pls_golite062009
  • 1.53488375271101 bayes_pls_golite062009
  • protein binding
  • 1.11897341394404 bayes_pls_golite062009
  • snoRNA binding
  • 0.503568445551651 bayes_pls_golite062009
  • nucleic acid binding
  • 0.417970425588631 bayes_pls_golite062009
    3 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle