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Protein Overview: ECM5_YEAST

Protein Complex Data

No complex found for this protein.

Mass Spectrometry Data

No mass spectrometry results found for this protein.

Yeast Two-Hybrid Data

The following interactions contain this protein:

NOT SHOWING SINGLE HITS. [ Show Single Hits ]

[View our yeast two-hybrid interpretation guidelines.]

No yeast two-hybrid interactions found for this protein.

Microscopy / Localization Data

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No microscopy data found in the PDR for this protein.

Protein Structure Data


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[View Top Sequence Alignments] [Show Ginzu Version Information]

Domains predicted:

#   Region(s) Method Confidence Match Description
1 View Details [1..114] deduced N/A No confident structure predictions are available.
2 View Details [115..211] PSI-BLAST 91.0103 DNA-binding domain from the dead ringer protein
3 View Details [212..317] PSI-BLAST 91.0103 DNA-binding domain from the dead ringer protein
4 View Details [318..394] deduced N/A No confident structure predictions are available.
5 View Details [395..739] MSA 9.11995 View MSA. No confident structure predictions are available.
6 View Details [740..824] deduced N/A No confident structure predictions are available.
7 View Details [825..886] PSI-BLAST 4.09691 Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain; Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain
8 View Details [887..1219] PSI-BLAST 23.30103 Heavy meromyosin subfragment
9 View Details [1220..1299] PSI-BLAST 2.30103 Nuclear corepressor KAP-1 (TIF-1beta)
10 View Details [1300..1411] deduced N/A Confident ab initio structure predictions are available.

Functions predicted (by domain):

# Gene Ontology predictions
1 No functions predicted.
2 No functions predicted.
3
Term Confidence Notes
  • binding
  • 2.82429745664596 bayes_pls_golite062009
  • nucleic acid binding
  • 1.96196521368194 bayes_pls_golite062009
  • DNA binding
  • 1.95175882800914 bayes_pls_golite062009
  • transcription regulator activity
  • 1.69129851237145 bayes_pls_golite062009
  • transcription coactivator activity
  • 0.9777334079728 bayes_pls_golite062009
  • protein binding
  • 0.923807406971133 bayes_pls_golite062009
  • general RNA polymerase II transcription factor activity
  • 0.89101605547219 bayes_pls_golite062009
  • transcription activator activity
  • 0.302416902310042 bayes_pls_golite062009
  • transcription factor activity
  • 0.143417837230029 bayes_pls_golite062009
  • transcription factor binding
  • 0.0217863068537998 bayes_pls_golite062009
    4 No functions predicted.
    5 No functions predicted.
    6 No functions predicted.
    7 No functions predicted.
    8 No functions predicted.
    9 No functions predicted.
    10 No functions predicted.




    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)


    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle