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Protein Overview: gi|23098578, gi|...

General Information:
Name(s) found: gi|23098578 [NCBI NR]
gi|22776804 [NCBI NR]
Description(s) found:
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  • gi|23098578|ref|NP_692044.1| cation efflux system [Oceanobacillus iheyensis HTE831] [NCBI NR]
  • gi|22776804|dbj|BAC13079.1| cation efflux system (zinc:cadmium) [Oceanobacillus iheyensis HTE831] [NCBI NR]
  • cation efflux system [Oceanobacillus iheyensis HTE831]gi|22776804|dbj|BAC13079.1| cation efflux system (zinc:cadmium) [Oceanobacillus iheyensis HTE831] [nrdb_11152004_Chlamydomonas]
  • cation efflux system (zinc:cadmium) [Oceanobacillus iheyensis HTE831] [nr-271106-contam.fasta]
  • cation efflux system [Oceanobacillus iheyensis HTE831] [nr-271106-contam.fasta]
    • Organism: Oceanobacillus iheyensis HTE831
    Length: 290 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDRSDHLKQG EKGAWLSIIA YLILASSKLY IASIGSSDGL RADGLNNLTD IVTSVAVLIG  60
   61 LKIARKPPDD IHRYGHYRAE TIASLFAAFI MMFIGLQVIF EAGQKLINSS YTQPDMLTAW 120
  121 TAIFAAGIML CVYRFNLRLS RKIESGSLYA AAMDNKADAL VSIGVFIGII GAQFGLFWLD 180
  181 PLTAGVVGII ICKTAWDIFK DSTITLTDGF DDEKLTEIKE TIDKDPSVLR VDDIKGRIHG 240
  241 NQELLDITIH VDPNLTVAQG HEITDRIEEY LYDKHRISHA LIHIEPFEEQ

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..290] PSI-BLAST 56.221849 No description for 2qfiA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • cation transmembrane transporter activity
    		•  6.3253503604398 bayes_pls_golite062009
  • ion transmembrane transporter activity
    		•  6.22189384650962 bayes_pls_golite062009
  • substrate-specific transmembrane transporter activity
    		•  5.82185991246167 bayes_pls_golite062009
  • transporter activity
    		•  4.27173462293249 bayes_pls_golite062009
  • transmembrane transporter activity
    		•  4.18558383943492 bayes_pls_golite062009
  • substrate-specific transporter activity
    		•  3.94511592355578 bayes_pls_golite062009
  • efflux transmembrane transporter activity
    		•  1.98656970252979 bayes_pls_golite062009
  • inorganic cation transmembrane transporter activity
    		•  1.95281540802467 bayes_pls_golite062009
  • metal ion transmembrane transporter activity
    		•  1.72936429569357 bayes_pls_golite062009
  • cation channel activity
    		•  1.1547412338864 bayes_pls_golite062009
  • ion channel activity
    		•  1.01093555209783 bayes_pls_golite062009
  • passive transmembrane transporter activity
    		•  0.963824080292546 bayes_pls_golite062009
  • channel activity
    		•  0.963824080292546 bayes_pls_golite062009
  • substrate-specific channel activity
    		•  0.948079854416241 bayes_pls_golite062009
  • binding
    		•  0.812276444952942 bayes_pls_golite062009
  • di-, tri-valent inorganic cation transmembrane transporter activity
    		•  0.775439159437009 bayes_pls_golite062009
  • active transmembrane transporter activity
    		•  0.490905558612378 bayes_pls_golite062009
  • transition metal ion transmembrane transporter activity
    		•  0.255026640963499 bayes_pls_golite062009
  • protein binding
    		•  0.0921963177320718 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle