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Protein Overview: RTOR1_ARATH

General Information:
Name(s) found: RTOR1_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Regulatory-associated protein of TOR 1 OS=Arabidopsis thaliana GN=RAPTOR1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 1344 amino acids

    Gene Ontology:
    Cellular Component: CUL4 RING ubiquitin ligase complex [ISS]
    Biological Process: embryonic development ending in seed dormancy [IMP]
    cell growth [IMP]
    Molecular Function: nucleotide binding [ISS]
    protein binding [IPI]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MALGDLMVSR FSQSSVSLVS NHRYDEDCVS SHDDGDSRRK DSEAKSSSSY GNGTTEGAAT  60
   61 ATSMAYLPQT IVLCELRHDA SEASAPLGTS EIVLVPKWRL KERMKTGCVA LVLCLNITVD 120
  121 PPDVIKISPC ARIEAWIDPF SMAPPKALET IGKNLSTQYE RWQPRARYKV QLDPTVDEVR 180
  181 KLCLTCRKYA KTERVLFHYN GHGVPKPTAN GEIWVFNKSY TQYIPLPISE LDSWLKTPSI 240
  241 YVFDCSAARM ILNAFAELHD WGSSGSSGSS RDCILLAACD VHETLPQSVE FPADVFTSCL 300
  301 TTPIKMALKW FCRRSLLKEI IDESLIDRIP GRQNDRKTLL GELNWIFTAV TDTIAWNVLP 360
  361 HELFQRLFRQ DLLVASLFRN FLLAERIMRS ANCNPISHPM LPPTHQHHMW DAWDMAAEIC 420
  421 LSQLPQLVLD PSTEFQPSPF FTEQLTAFEV WLDHGSEHKK PPEQLPIVLQ VLLSQCHRFR 480
  481 ALVLLGRFLD MGSWAVDLAL SVGIFPYVLK LLQTTTNELR QILVFIWTKI LALDKSCQID 540
  541 LVKDGGHTYF IRFLDSSGAF PEQRAMAAFV LAVIVDGHRR GQEACLEANL IGVCLGHLEA 600
  601 SRPSDPQPEP LFLQWLCLCL GKLWEDFMEA QIMGREANAF EKLAPLLSEP QPEVRAAAVF 660
  661 ALGTLLDIGF DSNKSVVEDE FDDDEKIRAE DAIIKSLLDV VSDGSPLVRA EVAVALARFA 720
  721 FGHKQHLKLA AASYWKPQSS SLLTSLPSIA KFHDPGSATI VSLHMSPLTR ASTDSQPVAR 780
  781 ESRISSSPLG SSGLMQGSPL SDDSSLHSDS GMMHDSVSNG AVHQPRLLDN AVYSQCVRAM 840
  841 FALAKDPSPR IASLGRRVLS IIGIEQVVAK PSKPTGRPGE AATTSHTPLA GLARSSSWFD 900
  901 MHAGNLPLSF RTPPVSPPRT NYLSGLRRVC SLEFRPHLLG SPDSGLADPL LGASGSERSL 960
  961 LPLSTIYGWS CGHFSKPLLG GADASQEIAA KREEKEKFAL EHIAKCQHSS ISKLNNNPIA1020
 1021 NWDTRFETGT KTALLHPFSP IVVAADENER IRVWNYEEAT LLNGFDNHDF PDKGISKLCL1080
 1081 INELDDSLLL VASCDGSVRI WKNYATKGKQ KLVTGFSSIQ GHKPGARDLN AVVDWQQQSG1140
 1141 YLYASGETST VTLWDLEKEQ LVRSVPSESE CGVTALSASQ VHGGQLAAGF ADGSLRLYDV1200
 1201 RSPEPLVCAT RPHQKVERVV GLSFQPGLDP AKVVSASQAG DIQFLDLRTT RDTYLTIDAH1260
 1261 RGSLTALAVH RHAPIIASGS AKQLIKVFSL QGEQLGIIRY YPSFMAQKIG SVSCLTFHPY1320
 1321 QVLLAAGAAD SFVSIYTHDN SQAR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..236] deduced N/A No confident structure predictions are available.
    2 View Details [237..320] MSA 1.049984 View MSA. No confident structure predictions are available.
    3 View Details [321..407] deduced N/A No confident structure predictions are available.
    4 View Details [408..637] deduced N/A No confident structure predictions are available.
    5 View Details [638..704] deduced N/A No confident structure predictions are available.
    6 View Details [705..787] deduced N/A No confident structure predictions are available.
    7 View Details [788..935] PSI-BLAST 18.221849 Crystal Structure analysis of the beta-propeller protein Ski8p
    8 View Details [936..1344] PSI-BLAST 81.154902 No description for 2ovpB was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.85

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle