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Protein Overview: TNPO1_ARATH

General Information:
Name(s) found: TNPO1_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Transportin-1 OS=Arabidopsis thaliana GN=TRN1 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 891 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA][ISS]
    cytoplasm [IDA][ISS]
    nuclear pore [ISS]
    Biological Process: nuclear import [IDA]
    protein import into nucleus, docking [ISS]
    Molecular Function: protein transporter activity [IDA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAATAVVWQP RDDGLAEICS LLEQQISPSS VVDKSQIWKQ LQHFSQFPDF NNYLVFILVR  60
   61 AEGKSVEVRQ AAGLLLKNNL RGAYPSMTQE NQKYIKSELL PCLGAADRNI RTTVGTIISV 120
  121 IVNIEGVSGW HELLPALVTC LDSNDLNHMD GAMDALSKIC EDIPHVLDTE VPGLAERPIN 180
  181 IFLPRLLQFF QSPHASLRKL ALGSVNQYII IMPAALYNSL DKYLQGLFVL ANDPVPEVRK 240
  241 LVCAAFVHLT EVLPSSIEPH LRNVMEYMLQ VNRDPDEEVS LEACEFWSAY CDAQLPPENL 300
  301 KEFLPRLIPV LLENMAYADD DESLLDAEED ESQPDRDQDL KPRFHTSRLH GSEDFDDDDD 360
  361 DSFNVWNLRK CSAAAIDVLS NVFGDEILPA LMPLIQKNLS ASGDEAWKQR EAAVLALGAI 420
  421 AEGCMNGLYP HLSEIVAFLL PLLDDKFPLI RSISCWTLSR FGKYLIQESG NPKGYEQFEK 480
  481 VLMGLLRRLL DTNKRVQEAA CSAFATVEED AAEELVPHLG VILQHLMCAF GKYQRRNLRI 540
  541 VYDAIGTLAD SVREELNKPA YLEILMPPLV AKWQQLSNSD KDLFPLLECF TSISQALGVG 600
  601 FAPFAQPVFQ RCMDIIQLQQ LAKVNPASAG AQYDREFIVC SLDLLSGLAE GLGSGIESLV 660
  661 QQSNLRDLLL NCCIDEAADV RQSAFALMGD LARVFPVYLQ PRLLDFLEIA SQQLSANLNR 720
  721 ENLSVANNAC WAIGELAVKV RQEVSPIVAK VVSSLGLILQ HGEGVNKALV ENSAITLGRL 780
  781 AWIRPDLVAP HMDHFMKPWC MALSMVRDDI EKEDAFRGLC AVVKVNPSGG VSSLVFICQA 840
  841 IASWHEIRSE DVQTEVSQVL NGYKHMLGNS WAECLSALDP PVKERLARYQ V

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..891] PSI-BLAST 143.0 No description for 2qmrA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle